RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
CAPN12-202ENST00000593700 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 MAP4K3Q8IVH8 894 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 LRRC71Q8N4P6 559 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 C7orf31Q8N865 590 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 TMEM161BQ8NDZ6 487 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 TRAPPC12Q8WVT3 735 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 BSNDQ8WZ55 320 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 BICD1Q96G01 975 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
CAPN12-202ENST00000593700 MED15Q96RN5 788 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 DUSP9Q99956 384 aaKnown RBP16.07■□□□□ 0.16
CAPN12-202ENST00000593700 HTATIP2Q9BUP3 242 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 STRA6Q9BX79 667 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 SEZ6LQ9BYH1 1024 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 SUCLA2Q9P2R7 463 aaPredicted RBP16.07■□□□□ 0.16
CAPN12-202ENST00000593700 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 ZMYM2Q9UBW7 1377 aa16.07■□□□□ 0.16
CAPN12-202ENST00000593700 C17orf102A2RUQ5 167 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 SLC16A3O15427 465 aaKnown RBP16.06■□□□□ 0.16
CAPN12-202ENST00000593700 NR3C1P04150 777 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 EPB41P11171 864 aaKnown RBP16.06■□□□□ 0.16
CAPN12-202ENST00000593700 ATP1A3P13637 1013 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 PHKA2P46019 1235 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
CAPN12-202ENST00000593700 CLCN3P51790 818 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 ZNF75DP51815 510 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 CAPSQ13938 189 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 CREBRFQ8IUR6 639 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 ASAP3Q8TDY4 903 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 LMBR1Q8WVP7 490 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 KAT2BQ92831 832 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 SCLT1Q96NL6 688 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 HSD3B7Q9H2F3 369 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 TMEM134Q9H6X4 195 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 IFNKQ9P0W0 207 aa16.06■□□□□ 0.16
CAPN12-202ENST00000593700 K7ERI5 159 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 KIAA0391O15091 583 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 POU5F1BQ06416 359 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 LAMTOR4Q0VGL1 99 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 ADAM9Q13443 819 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 MAPK6Q16659 721 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 CDCA2Q69YH5 1023 aaPredicted RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 ARMCX5Q6P1M9 558 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 LRRC55Q6ZSA7 311 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 ZNF410Q86VK4 478 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 C12orf56Q8IXR9 622 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 DRC7Q8IY82 874 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 RNF149Q8NC42 400 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 PRPF31Q8WWY3 499 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 NLRP4Q96MN2 994 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 NFKBIZQ9BYH8 718 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 METTL14Q9HCE5 456 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
CAPN12-202ENST00000593700 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 CENPFP49454 3210 aa16.05■□□□□ 0.16
CAPN12-202ENST00000593700 SMIM35A0A1B0GVV1 85 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 MYADML2A6NDP7 307 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 LIG4P49917 911 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 PPP2R3AQ06190 1150 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 KRT31Q15323 416 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 UBE2Q1Q7Z7E8 422 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 SLC9A9Q8IVB4 645 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 LINC01465Q8N7H1 131 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 KLHDC9Q8NEP7 349 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 XPO4Q9C0E2 1151 aaKnown RBP16.04■□□□□ 0.16
CAPN12-202ENST00000593700 C11orf49Q9H6J7 331 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 PHF24Q9UPV7 400 aa16.04■□□□□ 0.16
CAPN12-202ENST00000593700 ADGRA3Q8IWK6 1321 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
CAPN12-202ENST00000593700 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
CAPN12-202ENST00000593700 N4BP3O15049 544 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
CAPN12-202ENST00000593700 ASGR1P07306 291 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 CYP2C9P11712 490 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 COPB1P53618 953 aaKnown RBP16.03■□□□□ 0.16
CAPN12-202ENST00000593700 MARSP56192 900 aaKnown RBP16.03■□□□□ 0.16
CAPN12-202ENST00000593700 MAN2A1Q16706 1144 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 FAM47CQ5HY64 1035 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 SLFN12LQ6IEE8 588 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 CXCL17Q6UXB2 119 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 RSPH3Q86UC2 560 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 PDLIM2Q96JY6 352 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
CAPN12-202ENST00000593700 MRPL4Q9BYD3 311 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms