RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZCCHC6Q5VYS8 1495 aaKnown RBP6.55□□□□□ -1.36
SMAD4-216ENST00000593223 K7ESF4 209 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 K7ESM1 405 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 FOXD2O60548 495 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-216ENST00000593223 TOX4O94842 621 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 SEC24DO94855 1032 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-216ENST00000593223 LY86O95711 162 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 MT-CO1P00395 513 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 ITGB3P05106 788 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 MYBL2P10244 700 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 GAAP10253 952 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 ADCY7P51828 1080 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 HGFACQ04756 655 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 UNC5BQ8IZJ1 945 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 SHCBP1Q8NEM2 672 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 OR14A2Q96R54 314 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 SMAD5Q99717 465 aaKnown RBP6.55□□□□□ -1.36
SMAD4-216ENST00000593223 MKS1Q9NXB0 559 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 RCAN3Q9UKA8 241 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 ZBTB21Q9ULJ3 1066 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 CLASP1Q7Z460 1538 aa6.55□□□□□ -1.36
SMAD4-216ENST00000593223 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 A0A1W2PRX2 142 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 MATN2O00339 956 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 PRAMEF4O60810 478 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 ALDH1A2O94788 518 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 CFBP00751 764 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 JUNP05412 331 aaKnown RBP6.54□□□□□ -1.36
SMAD4-216ENST00000593223 IARSP41252 1262 aaKnown RBP6.54□□□□□ -1.36
SMAD4-216ENST00000593223 KIR2DL3P43628 341 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 SLC41A1Q8IVJ1 513 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 PIK3C3Q8NEB9 887 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 CFHR4Q92496 578 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 RABGGTAQ92696 567 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 ORAI2Q96SN7 254 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 IFT122Q9HBG6 1241 aa6.54□□□□□ -1.36
SMAD4-216ENST00000593223 IFT140Q96RY7 1462 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 GPR42O15529 346 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 VSIG10L2P0DP72 767 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 OSMP13725 252 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 RPS19P39019 145 aaKnown RBP6.53□□□□□ -1.36
SMAD4-216ENST00000593223 SLC5A3P53794 718 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 RIN1Q13671 783 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 ACAP2Q15057 778 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 MUM1Q2TAK8 710 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 GAGE13Q4V321 117 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 CHST13Q8NET6 341 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 PPP1R14CQ8TAE6 165 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 PLA2G12BQ9BX93 195 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 ACE2Q9BYF1 805 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-216ENST00000593223 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
SMAD4-216ENST00000593223 ZFR2Q9UPR6 939 aaKnown RBP6.53□□□□□ -1.36
SMAD4-216ENST00000593223 AQRO60306 1485 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMAD4-216ENST00000593223 CCND1P24385 295 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 BRDTQ58F21 947 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-216ENST00000593223 TCTN3Q6NUS6 607 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 RPUSD2Q8IZ73 545 aaKnown RBP6.52□□□□□ -1.37
SMAD4-216ENST00000593223 UBE2Q2Q8WVN8 375 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 FATE1Q969F0 183 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 TMEM176AQ96HP8 235 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 PAWRQ96IZ0 340 aaKnown RBP6.52□□□□□ -1.37
SMAD4-216ENST00000593223 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMAD4-216ENST00000593223 NELFAQ9H3P2 528 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 MSL2Q9HCI7 577 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 GPR45Q9Y5Y3 372 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 MRFAP1Q9Y605 127 aa6.52□□□□□ -1.37
SMAD4-216ENST00000593223 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
SMAD4-216ENST00000593223 A0A1W2PR48 441 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 SHTN1A0MZ66 631 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 PMS2P1A4D2B8 440 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 GABRDO14764 452 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 NRP1O14786 923 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
SMAD4-216ENST00000593223 LTA4HP09960 611 aaKnown RBP6.51□□□□□ -1.37
SMAD4-216ENST00000593223 NPEPPSP55786 919 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 GRM7Q14831 915 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 UBE3CQ15386 1083 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 PTPN21Q16825 1174 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 FAM180AQ6UWF9 173 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 TAS1R1Q7RTX1 841 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 KCNK18Q7Z418 384 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 PNMA8AQ86V59 439 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-216ENST00000593223 GPR135Q8IZ08 494 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 CBARPQ8N350 705 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-216ENST00000593223 C1orf162Q8NEQ5 155 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-216ENST00000593223 TSPEARQ8WU66 669 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 ARL8AQ96BM9 186 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 FAXDC2Q96IV6 333 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 GPHA2Q96T91 129 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 IL23AQ9NPF7 189 aa6.51□□□□□ -1.37
SMAD4-216ENST00000593223 UBE2QL1A1L167 161 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 FOXS1O43638 330 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 MTNR1BP49286 362 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 MEF2AQ02078 507 aaPredicted RBP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 DUSP2Q05923 314 aa6.5□□□□□ -1.37
SMAD4-216ENST00000593223 SAFB2Q14151 953 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMAD4-216ENST00000593223 MUM1L1Q5H9M0 696 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms