RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
ERCC1-217ENST00000592905 GPM6BQ13491 265 aa16.73■□□□□ 0.27
ERCC1-217ENST00000592905 PPP2R5AQ15172 486 aa16.73■□□□□ 0.27
ERCC1-217ENST00000592905 SPOUT1Q5T280 376 aaKnown RBP16.73■□□□□ 0.27
ERCC1-217ENST00000592905 GPBP1Q86WP2 473 aa16.73■□□□□ 0.27
ERCC1-217ENST00000592905 CLP1Q92989 425 aaKnown RBP16.73■□□□□ 0.27
ERCC1-217ENST00000592905 FZD8Q9H461 694 aa16.73■□□□□ 0.27
ERCC1-217ENST00000592905 TYW1Q9NV66 732 aaKnown RBP16.73■□□□□ 0.27
ERCC1-217ENST00000592905 MTCH2Q9Y6C9 303 aa16.73■□□□□ 0.27
ERCC1-217ENST00000592905 PLXNA4Q9HCM2 1894 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 YEATS4O95619 227 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 PRKCBP05771 671 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 GUCY2CP25092 1073 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 AXLP30530 894 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 NPTX2P47972 431 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 RRAGBQ5VZM2 374 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 NOTUMQ6P988 496 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 ABI1Q8IZP0 508 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 TMEM117Q9H0C3 514 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 C2orf40Q9H1Z8 148 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 PRMT7Q9NVM4 692 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-217ENST00000592905 CCDC39Q9UFE4 941 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 HES2Q9Y543 173 aa16.72■□□□□ 0.27
ERCC1-217ENST00000592905 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
ERCC1-217ENST00000592905 ATG2AQ2TAZ0 1938 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 A0A087X0B3 334 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 SLC16A4O15374 487 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 HOXA2O43364 376 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 ZNF623O75123 536 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 PPP6R2O75170 966 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 CSPG5O95196 566 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 NPTXRO95502 500 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 SKIP12755 728 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 DDIT3P35638 169 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 TXLNAP40222 546 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 PCBP1Q15365 356 aaKnown RBP eCLIP16.71■□□□□ 0.27
ERCC1-217ENST00000592905 MAPK6Q16659 721 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 TMEM132AQ24JP5 1023 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 MRPL10Q7Z7H8 261 aaKnown RBP16.71■□□□□ 0.27
ERCC1-217ENST00000592905 PDILTQ8N807 584 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 SMG8Q8ND04 991 aaKnown RBP16.71■□□□□ 0.27
ERCC1-217ENST00000592905 LARP4BQ92615 738 aaKnown RBP16.71■□□□□ 0.27
ERCC1-217ENST00000592905 APOL6Q9BWW8 343 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 CCDC113Q9H0I3 377 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 CWH43Q9H720 699 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 ALG13Q9NP73 1137 aaKnown RBP16.71■□□□□ 0.27
ERCC1-217ENST00000592905 KMT5AQ9NQR1 393 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 INPP5FQ9Y2H2 1132 aa16.71■□□□□ 0.27
ERCC1-217ENST00000592905 A0A1B0GUA9 196 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 H3BNC9 293 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 K7ERI5 159 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 GTPBP6O43824 516 aaPredicted RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 CUTAO60888 179 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 OFD1O75665 1012 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 RAB27AP51159 221 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 DMP1Q13316 513 aaPredicted RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 PRPF4BQ13523 1007 aaKnown RBP16.7■□□□□ 0.26
ERCC1-217ENST00000592905 FAM187BQ17R55 369 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 NAALADL2Q58DX5 795 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 AGMOQ6ZNB7 445 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 REEP2Q9BRK0 252 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 TIPINQ9BVW5 301 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 PCDHA7Q9UN72 937 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 IPPQ9Y573 584 aa16.7■□□□□ 0.26
ERCC1-217ENST00000592905 TRIP11Q15643 1979 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 UNC80Q8N2C7 3258 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 SPTBN5Q9NRC6 3674 aaKnown RBP16.69■□□□□ 0.26
ERCC1-217ENST00000592905 TDRD15B5MCY1 1934 aaKnown RBP16.69■□□□□ 0.26
ERCC1-217ENST00000592905 ACKR2O00590 384 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 GRM6O15303 877 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 RB1P06400 928 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 ITGA4P13612 1032 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 PLS3P13797 630 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 PBX3P40426 434 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 ME1P48163 572 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 EFNA5P52803 228 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 GIT2Q14161 759 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 AXDND1Q5T1B0 1012 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-217ENST00000592905 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 EEF1DP3Q658K8 133 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 SLC27A1Q6PCB7 646 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 PRIMPOLQ96LW4 560 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 TRIM6Q9C030 488 aaPredicted RBP16.69■□□□□ 0.26
ERCC1-217ENST00000592905 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
ERCC1-217ENST00000592905 PDZD7Q9H5P4 517 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms