RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 GZMAP12544 262 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PEX5P50542 639 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 MAGOHP61326 146 aaKnown RBP12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CROCCP2Q86T23 111 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 RAPGEF5Q92565 580 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 MAGOHBQ96A72 148 aaKnown RBP12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CENPHQ9H3R5 247 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
ZNF540-210ENST00000592533 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PODXLO00592 558 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 RTN2O75298 545 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 KRT13P13646 458 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 C1orf220Q5T0J3 134 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 BANK1Q8NDB2 785 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 RUNDC3BQ96NL0 473 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 DCDC2CA8MYV0 355 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 ARP10275 920 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 SMTNP53814 917 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PMS2P54278 862 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 GPC5P78333 572 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CETN1Q12798 172 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 ERMARDQ5T6L9 678 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PRELID2Q8N945 189 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CHURC1Q8WUH1 139 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CABS1Q96KC9 395 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 CSRNP1Q96S65 589 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 PARP2Q9UGN5 583 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
ZNF540-210ENST00000592533 ARID2Q68CP9 1835 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 EMSYQ7Z589 1322 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 IPO5O00410 1097 aaKnown RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 LYPLA2O95372 231 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 TMOD1P28289 359 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 MMP13P45452 471 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 VAMP7P51809 220 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 CDR1P51861 262 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 GHRHRQ02643 423 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 STYK1Q6J9G0 422 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 SLC30A10Q6XR72 485 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 ARHGEF19Q8IW93 802 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 SPICE1Q8N0Z3 855 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 HOOK2Q96ED9 719 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 TDRD3Q9H7E2 651 aaKnown RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.4
ZNF540-210ENST00000592533 NOCTQ9UK39 431 aaKnown RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.4
ZNF540-210ENST00000592533 FTLP02792 175 aaPredicted RBP12.52□□□□□ -0.41
ZNF540-210ENST00000592533 ECE1P42892 770 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 HSD17B4P51659 736 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 PPP3CAQ08209 521 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 ARHGAP44Q17R89 818 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 ODF2Q5BJF6 829 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 FAM160B2Q86V87 743 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 FAM71AQ8IYT1 594 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 SYCP3Q8IZU3 236 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 SEC16BQ96JE7 1060 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 ACCSQ96QU6 501 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC134Q9H6E4 229 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 A1CFQ9NQ94 594 aaKnown RBP12.52□□□□□ -0.41
ZNF540-210ENST00000592533 LARSQ9P2J5 1176 aaKnown RBP12.52□□□□□ -0.41
ZNF540-210ENST00000592533 AFF2P51816 1311 aa12.52□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC169A6NNP5 214 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 K7ENM7 598 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 RASSF9O75901 435 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 DRD4P21917 467 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 DLG4P78352 724 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 IFT88Q13099 833 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 QPCTQ16769 361 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 CCDC13Q8IYE1 715 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 GLG1Q92896 1179 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 CAND2O75155 1236 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 CHRNB2P17787 502 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 GTF2BQ00403 316 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 PRPF4BQ13523 1007 aaKnown RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 EPS8L1Q8TE68 723 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 SLCO2A1Q92959 643 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 RNF25Q96BH1 459 aaPredicted RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 XPO6Q96QU8 1125 aaKnown RBP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 YY1AP1Q9H869 796 aa12.51□□□□□ -0.41
ZNF540-210ENST00000592533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZNF540-210ENST00000592533 LRRN2O75325 713 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms