RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 AK8Q96MA6 479 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 EIF2AQ9BY44 585 aaKnown RBP30.14■■■□□ 2.42
SMAD4-213ENST00000591914 CSRNP2Q9H175 543 aa30.14■■■□□ 2.42
SMAD4-213ENST00000591914 CSPG5O95196 566 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 BMP1P13497 986 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 IRS1P35568 1242 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PPM1AP35813 382 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PBX3P40426 434 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 KCNQ1P51787 676 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 RESTQ13127 1097 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PPP2R5AQ15172 486 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 SF3A1Q15459 793 aaKnown RBP30.13■■■□□ 2.41
SMAD4-213ENST00000591914 FAM187BQ17R55 369 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 ZBTB8OSQ8IWT0 167 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PRIMPOLQ96LW4 560 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PNMA5Q96PV4 448 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 C2orf40Q9H1Z8 148 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 FZD8Q9H461 694 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 FOXD4L1Q9NU39 408 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 PRMT7Q9NVM4 692 aaPredicted RBP30.13■■■□□ 2.41
SMAD4-213ENST00000591914 LZTS1Q9Y250 596 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 CNTNAP2Q9UHC6 1331 aa30.13■■■□□ 2.41
SMAD4-213ENST00000591914 HYAL1Q12794 435 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 PABPC5Q96DU9 382 aaKnown RBP30.12■■■□□ 2.41
SMAD4-213ENST00000591914 NT5C3AQ9H0P0 336 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 RSAD1Q9HA92 442 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 TBC1D13Q9NVG8 400 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 MTMR6Q9Y217 621 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 INPP5FQ9Y2H2 1132 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 IPPQ9Y573 584 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 TTC28Q96AY4 2481 aa30.12■■■□□ 2.41
SMAD4-213ENST00000591914 A0A1B0GUA9 196 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 NCK2O43639 380 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 MRPS27Q92552 414 aaKnown RBP30.11■■■□□ 2.41
SMAD4-213ENST00000591914 CCDC113Q9H0I3 377 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 POLD4Q9HCU8 107 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 TLR9Q9NR96 1032 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 SPG21Q9NZD8 308 aa30.11■■■□□ 2.41
SMAD4-213ENST00000591914 SLC26A4O43511 780 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 BCAR1P56945 870 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 ZRSR1Q15695 479 aaKnown RBP30.1■■■□□ 2.41
SMAD4-213ENST00000591914 RINT1Q6NUQ1 792 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 SLC27A1Q6PCB7 646 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 C1orf186Q6ZWK4 172 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 SLC39A11Q8N1S5 342 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 DEPTORQ8TB45 409 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 IFT74Q96LB3 600 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 RUSC1Q9BVN2 902 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 UBN1Q9NPG3 1134 aa30.1■■■□□ 2.41
SMAD4-213ENST00000591914 MUC3AQ02505 3323 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 ITGA4P13612 1032 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 KCNA5P22460 613 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 ALDH7A1P49419 539 aaKnown RBP30.09■■■□□ 2.41
SMAD4-213ENST00000591914 CTC1Q2NKJ3 1217 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 TMEM119Q4V9L6 283 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 CABP7Q86V35 215 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 DAW1Q8N136 415 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 URGCPQ8TCY9 931 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 ADAMTS19Q8TE59 1207 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 PPP2R3CQ969Q6 453 aa30.09■■■□□ 2.41
SMAD4-213ENST00000591914 FSCN2O14926 492 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 INPPL1O15357 1258 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 STX6O43752 255 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 LONP1P36776 959 aaKnown RBP30.08■■■□□ 2.41
SMAD4-213ENST00000591914 AFF1P51825 1210 aaKnown RBP30.08■■■□□ 2.41
SMAD4-213ENST00000591914 ERVFC1P60507 584 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 PTPAQ15257 358 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 MAPK6Q16659 721 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 LEXMQ3ZCV2 418 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 PDE12Q6L8Q7 609 aaKnown RBP30.08■■■□□ 2.41
SMAD4-213ENST00000591914 ADGRD2Q7Z7M1 963 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 CDK5RAP3Q96JB5 506 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 RNF39Q9H2S5 420 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 NRDE2Q9H7Z3 1164 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 PUF60Q9UHX1 559 aaKnown RBP30.08■■■□□ 2.41
SMAD4-213ENST00000591914 HES2Q9Y543 173 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 PCDHGC5Q9Y5F6 944 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 CLIC4Q9Y696 253 aa30.08■■■□□ 2.41
SMAD4-213ENST00000591914 CARNS1A5YM72 827 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 HIP1RO75146 1068 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 ZC3H11AO75152 810 aaKnown RBP eCLIP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 GUCY2CP25092 1073 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 EFNA5P52803 228 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 KRT17Q04695 432 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 GRIN1Q05586 938 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 RNASELQ05823 741 aaKnown RBP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 MAPK7Q13164 816 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 CDR2LQ86X02 465 aaPredicted RBP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 HSCBQ8IWL3 235 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 SYT2Q8N9I0 419 aaPredicted RBP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 PLIN2Q99541 437 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 KIFC3Q9BVG8 833 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 TIPINQ9BVW5 301 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 TRIM6Q9C030 488 aaPredicted RBP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 NXF3Q9H4D5 531 aaKnown RBP30.07■■■□□ 2.4
SMAD4-213ENST00000591914 CLDND1Q9NY35 253 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 KANSL3Q9P2N6 904 aa30.07■■■□□ 2.4
SMAD4-213ENST00000591914 TTLL13PA6NNM8 815 aa30.06■■■□□ 2.4
SMAD4-213ENST00000591914 ACKR2O00590 384 aa30.06■■■□□ 2.4
SMAD4-213ENST00000591914 PRKCBP05771 671 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms