RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	SLC39A14	Q15043	492 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	SKIV2L	Q15477	1246 aa	Known RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	FAM187B	Q17R55	369 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	SPECC1	Q5M775	1068 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	GLB1L	Q6UWU2	654 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	MRPL10	Q7Z7H8	261 aa	Known RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	DAW1	Q8N136	415 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	KLHL23	Q8NBE8	558 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	DEPTOR	Q8TB45	409 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PGBD4	Q96DM1	585 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	CCDC51	Q96ER9	411 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PRIMPOL	Q96LW4	560 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	DRC1	Q96MC2	740 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	USP28	Q96RU2	1077 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	EIF2A	Q9BY44	585 aa	Known RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	CSRNP2	Q9H175	543 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	FZD8	Q9H461	694 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	ALG13	Q9NP73	1137 aa	Known RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PRDM6	Q9NQX0	595 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	AAAS	Q9NRG9	546 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	FBXO2	Q9UK22	296 aa	Predicted RBP	10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239	PCDHB12	Q9Y5F1	795 aa		10.16	□□□□□ -0.78
DNMT1-223	ENST00000591239		A0A1B0GUA9	196 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	OFD1	O75665	1012 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	ZSCAN22	P10073	491 aa	Predicted RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	LAG3	P18627	525 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	PLCG1	P19174	1290 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	NCL	P19338	710 aa	Known RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	GUCY2C	P25092	1073 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	NPTX2	P47972	431 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	EFNA5	P52803	228 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	PEX3	P56589	373 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	RAD51AP2	Q09MP3	1159 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	MAPK7	Q13164	816 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	KARS	Q15046	597 aa	Known RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	MAPK6	Q16659	721 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	CSPP1	Q1MSJ5	1256 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	ARSH	Q5FYA8	562 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	NOMO2	Q5JPE7	1267 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	SLC27A1	Q6PCB7	646 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	AGMO	Q6ZNB7	445 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	USP49	Q70CQ1	688 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	LRRC43	Q8N309	656 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	COLGALT1	Q8NBJ5	622 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	SMG8	Q8ND04	991 aa	Known RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	CNNM3	Q8NE01	707 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	RASSF8	Q8NHQ8	419 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	SPPL3	Q8TCT6	385 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	LRRC15	Q8TF66	581 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	RSPH1	Q8WYR4	309 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	EPSTI1	Q96J88	318 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	ZNF396	Q96N95	335 aa	Predicted RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	CLIC6	Q96NY7	704 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	KIFC3	Q9BVG8	833 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	TIPIN	Q9BVW5	301 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	MRPL9	Q9BYD2	267 aa	Known RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	CCSER1	Q9C0I3	900 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	CCDC113	Q9H0I3	377 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	LMAN2L	Q9H0V9	348 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	KCND2	Q9NZV8	630 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	TFIP11	Q9UBB9	837 aa	Known RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	IPP	Q9Y573	584 aa		10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.15	□□□□□ -0.78
DNMT1-223	ENST00000591239	KIAA1671	Q9BY89	1806 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	MUC3A	Q02505	3323 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	CNTNAP2	Q9UHC6	1331 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	TTLL13P	A6NNM8	815 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	CCDC169	A6NNP5	214 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	SFI1	A8K8P3	1242 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	ACKR2	O00590	384 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	FGF18	O76093	207 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	F13A1	P00488	732 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	PRKCB	P05771	671 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	ITGA4	P13612	1032 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	LIG1	P18858	919 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	DNAJB1	P25685	340 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	PBX3	P40426	434 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	NASP	P49321	788 aa	Predicted RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	DMP1	Q13316	513 aa	Predicted RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	PRPF4B	Q13523	1007 aa	Known RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	PKP1	Q13835	747 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	CAMK1	Q14012	370 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	DHX8	Q14562	1220 aa	Known RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	TIGD5	Q53EQ6	642 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	KCNT2	Q6UVM3	1135 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	CDR2L	Q86X02	465 aa	Predicted RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	THNSL1	Q8IYQ7	743 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	KRI1	Q8N9T8	703 aa	Known RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	LINC00301	Q8NCQ3	95 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	POF1B	Q8WVV4	589 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	SYMPK	Q92797	1274 aa	Known RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	ZNF558	Q96NG5	402 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	TRIM6	Q9C030	488 aa	Predicted RBP	10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	RSAD1	Q9HA92	442 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	C17orf75	Q9HAS0	396 aa		10.14	□□□□□ -0.79
DNMT1-223	ENST00000591239	UBN1	Q9NPG3	1134 aa		10.14	□□□□□ -0.79

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