RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 SH3GLB2Q9NR46 395 aa16.92■□□□□ 0.3
GHDC-211ENST00000590520 KANSL3Q9P2N6 904 aa16.92■□□□□ 0.3
GHDC-211ENST00000590520 MTCL1Q9Y4B5 1905 aaKnown RBP16.92■□□□□ 0.3
GHDC-211ENST00000590520 PI15O43692 258 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 TDP2O95551 362 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 SOD2P04179 222 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 ADH1AP07327 375 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 IFNAR1P17181 557 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 ID4P47928 161 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 NLRP5P59047 1200 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 NTRK3Q16288 839 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 PLA2G4FQ68DD2 849 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 AGMOQ6ZNB7 445 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 STAMQ92783 540 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 DPP7Q9UHL4 492 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 SSX2IPQ9Y2D8 614 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 FAN1Q9Y2M0 1017 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
GHDC-211ENST00000590520 OTOGLQ3ZCN5 2332 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 CYP3A7-CYP3A51PA0A087WV96 503 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 DDX11L8A8MPP1 907 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 LILRB3O75022 631 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 CDC45O75419 566 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 DDHD2O94830 711 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 CYP3A7P24462 503 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 PSMC5P62195 406 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 NONOQ15233 471 aaKnown RBP eCLIP16.9■□□□□ 0.3
GHDC-211ENST00000590520 MOXD1Q6UVY6 613 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 CYP26C1Q6V0L0 522 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 ANO5Q75V66 913 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 MRPL10Q7Z7H8 261 aaKnown RBP16.9■□□□□ 0.3
GHDC-211ENST00000590520 FBXL16Q8N461 479 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 SLC7A3Q8WY07 619 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 RHOBTB2Q9BYZ6 727 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 PCDHA4Q9UN74 947 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 FANCMQ8IYD8 2048 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 CLUHO75153 1309 aa16.9■□□□□ 0.3
GHDC-211ENST00000590520 C2CD2LO14523 706 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 NRP1O14786 923 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 NARSO43776 548 aaKnown RBP16.89■□□□□ 0.29
GHDC-211ENST00000590520 GLUD1P00367 558 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 ALDH2P05091 517 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 RFX1P22670 979 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
GHDC-211ENST00000590520 AK2P54819 239 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 KCNB2Q92953 911 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 MBOAT7Q96N66 472 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 RPS6KC1Q96S38 1066 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 AGXT2Q9BYV1 514 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 WDR6Q9NNW5 1121 aaKnown RBP16.89■□□□□ 0.29
GHDC-211ENST00000590520 MARCH5Q9NX47 278 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 EPS15L1Q9UBC2 864 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 WNT16Q9UBV4 365 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 PPME1Q9Y570 386 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 CEP250Q9BV73 2442 aa16.89■□□□□ 0.29
GHDC-211ENST00000590520 INPPL1O15357 1258 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 DKC1O60832 514 aaKnown RBP eCLIP16.88■□□□□ 0.29
GHDC-211ENST00000590520 N4BP1O75113 896 aaKnown RBP16.88■□□□□ 0.29
GHDC-211ENST00000590520 POMCP01189 267 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 CFHP08603 1231 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
GHDC-211ENST00000590520 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 GLUD2P49448 558 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 AFF1P51825 1210 aaKnown RBP16.88■□□□□ 0.29
GHDC-211ENST00000590520 UBXN11Q5T124 520 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 EXOC8Q8IYI6 725 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 PSPC1Q8WXF1 523 aaKnown RBP16.88■□□□□ 0.29
GHDC-211ENST00000590520 UBN1Q9NPG3 1134 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 PRG3Q9Y2Y8 225 aaPredicted RBP16.88■□□□□ 0.29
GHDC-211ENST00000590520 FRYLO94915 3013 aa16.88■□□□□ 0.29
GHDC-211ENST00000590520 TEX28O15482 410 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 GAS2O43903 313 aaKnown RBP16.87■□□□□ 0.29
GHDC-211ENST00000590520 SRFP11831 508 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 RFC5P40937 340 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 QARSP47897 775 aaKnown RBP16.87■□□□□ 0.29
GHDC-211ENST00000590520 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
GHDC-211ENST00000590520 DAGLBQ8NCG7 672 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 CNNM3Q8NE01 707 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 NXPE3Q969Y0 559 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 SEMA4AQ9H3S1 761 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 DHX33Q9H6R0 707 aaKnown RBP16.87■□□□□ 0.29
GHDC-211ENST00000590520 DDX25Q9UHL0 483 aaKnown RBP16.87■□□□□ 0.29
GHDC-211ENST00000590520 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 MIA3Q5JRA6 1907 aa16.87■□□□□ 0.29
GHDC-211ENST00000590520 CCDC195A0A1B0GUA6 201 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 KRBA1A5PL33 1030 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 STK25O00506 426 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 LMNAP02545 664 aaKnown RBP16.86■□□□□ 0.29
GHDC-211ENST00000590520 ITGA4P13612 1032 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
GHDC-211ENST00000590520 HSPA4P34932 840 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 OR1G1P47890 313 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 NPEPPSP55786 919 aa16.86■□□□□ 0.29
GHDC-211ENST00000590520 PPP2R5CQ13362 524 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms