RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CKAP2Q8WWK9 683 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 LRMDAQ9H2I8 198 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 ABCA3Q99758 1704 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 C2orf71A6NGG8 1288 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SIGLEC16A6NMB1 481 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 CLSTN1O94985 981 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 DCAF17Q5H9S7 520 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 SPATA16Q9BXB7 569 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 C12orf65Q9H3J6 166 aaKnown RBP16.28■□□□□ 0.2
CIRBP-228ENST00000590347 STOML1Q9UBI4 398 aa16.28■□□□□ 0.2
CIRBP-228ENST00000590347 TPD52L2O43399 206 aaKnown RBP16.27■□□□□ 0.2
CIRBP-228ENST00000590347 LYNP07948 512 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 GOLGA8HP0CJ92 632 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 DESP17661 470 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 TAC1P20366 129 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 CHKAP35790 457 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 GALK1P51570 392 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 ZNF365Q70YC5 407 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 MTDHQ86UE4 582 aaKnown RBP16.27■□□□□ 0.2
CIRBP-228ENST00000590347 SLC25A41Q8N5S1 370 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 ERLEC1Q96DZ1 483 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 MPP4Q96JB8 637 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 TTC1Q99614 292 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 PYM1Q9BRP8 204 aaKnown RBP16.27■□□□□ 0.2
CIRBP-228ENST00000590347 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.2
CIRBP-228ENST00000590347 UBN1Q9NPG3 1134 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 AMFRQ9UKV5 643 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 CHD4Q14839 1912 aa16.27■□□□□ 0.2
CIRBP-228ENST00000590347 CFAP69A5D8W1 941 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 POTEMA6NI47 508 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 TOM1O60784 492 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 ZBTB48P10074 688 aaPredicted RBP16.27■□□□□ 0.19
CIRBP-228ENST00000590347 MDH1BQ5I0G3 518 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 KCNK18Q7Z418 384 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 ZDHHC14Q8IZN3 488 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 TMTC2Q8N394 836 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 KRT35Q92764 455 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 TRAPPC9Q96Q05 1148 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 FAM118BQ9BPY3 351 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 ZNF510Q9Y2H8 683 aa16.27■□□□□ 0.19
CIRBP-228ENST00000590347 RBM47A0AV96 593 aaKnown RBP16.26■□□□□ 0.19
CIRBP-228ENST00000590347 GYS1P13807 737 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 WDR72Q3MJ13 1102 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 CCDC105Q8IYK2 499 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
CIRBP-228ENST00000590347 DHX36Q9H2U1 1008 aaKnown RBP16.26■□□□□ 0.19
CIRBP-228ENST00000590347 CTTNBP2NLQ9P2B4 639 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 FLT1P17948 1338 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 PGM3O95394 542 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 CYP7A1P22680 504 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 GALCP54803 685 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 MXD3Q9BW11 206 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 CCDC134Q9H6E4 229 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 DCLRE1BQ9H816 532 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 NPHS2Q9NP85 383 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 USP40Q9NVE5 1235 aa16.26■□□□□ 0.19
CIRBP-228ENST00000590347 WFS1O76024 890 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 RASSF2P50749 326 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 POLGP54098 1239 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 IGBP1P78318 339 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 THOC5Q13769 683 aaKnown RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 GIT2Q14161 759 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 TMED2Q15363 201 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 IZUMO2Q6UXV1 221 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 LCA5Q86VQ0 697 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 C4orf33Q8N1A6 199 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 AGGF1Q8N302 714 aaeCLIP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 MAF1Q9H063 256 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 VCX3BQ9H321 246 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 VCX3AQ9NNX9 186 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 ARHGEF38Q9NXL2 777 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 COL4A3BPQ9Y5P4 624 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 A0A1W2PRG0 241 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 BOLA2-SMG1P6H3BVE0 249 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 AMPD1P23109 780 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 PTENP60484 403 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 CDR2Q01850 454 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 H2AFVQ71UI9 128 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 CADM1Q9BY67 442 aaKnown RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 KRT82Q9NSB4 513 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 NKIRAS1Q9NYS0 192 aa16.25■□□□□ 0.19
CIRBP-228ENST00000590347 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
CIRBP-228ENST00000590347 PHTF1Q9UMS5 762 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms