RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 CYP4A11Q02928 519 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 PRKCZQ05513 592 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 SRSF11Q05519 484 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 TYRO3Q06418 890 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 ARHGAP1Q07960 439 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 UBAP2LQ14157 1087 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 TFDP1Q14186 410 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CTTNQ14247 550 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 DHX8Q14562 1220 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 PCBP1Q15365 356 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 NAALADL2Q58DX5 795 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 XKR9Q5GH70 373 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 USP49Q70CQ1 688 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 APBB1IPQ7Z5R6 666 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 TLK2Q86UE8 772 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 GPBP1Q86WP2 473 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CD99L2Q8TCZ2 262 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 NOC3LQ8WTT2 800 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 HVCN1Q96D96 273 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CEP170P1Q96L14 293 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 GAS2L1Q99501 681 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 TSG101Q99816 390 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 KATNBL1Q9H079 304 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 ATP6V0A4Q9HBG4 840 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 OLFML3Q9NRN5 406 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 BLOC1S4Q9NUP1 217 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 RGL1Q9NZL6 768 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 EXOC7Q9UPT5 735 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 PCDHA5Q9Y5H7 936 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 MCM3APO60318 1980 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GSTTP1A0A1W2PQM5 241 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GOLGA6L3A6NEY3 463 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PP2D1A8MPX8 630 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TMEM229AB2RXF0 380 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 H3BRB1 525 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 IKBKBO14920 756 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 DYNC1LI2O43237 492 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PEX10O60683 326 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 F11P03951 625 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 INHAP05111 366 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TPM2P07951 284 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 CYBAP13498 195 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 IDEP14735 1019 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 RPL13P26373 211 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 CST5P28325 142 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 CNGA1P29973 690 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 CYP2C19P33261 490 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 ADCYAP1R1P41586 468 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 RARRES1P49788 294 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 MRE11P49959 708 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 POLGP54098 1239 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GDF10P55107 478 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GJA9P57773 515 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 SP2Q02086 613 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PRKCEQ02156 737 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PTPN11Q06124 597 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 POU5F1BQ06416 359 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 NCBP1Q09161 790 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TBC1D8BQ0IIM8 1120 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 DMP1Q13316 513 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 MORC3Q14149 939 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 FSCN1Q16658 493 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 HERC4Q5GLZ8 1057 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 IER5Q5VY09 327 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 RINT1Q6NUQ1 792 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 RIPOR1Q6ZS17 1223 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 RSPH3Q86UC2 560 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 FAM114A1Q8IWE2 563 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 NME8Q8N427 588 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 FAM200AQ8TCP9 573 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 KCNN1Q92952 543 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GTPBP3Q969Y2 492 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 MTG1Q9BT17 334 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GZF1Q9H116 711 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 UPF3AQ9H1J1 476 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 C2orf40Q9H1Z8 148 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TUT1Q9H6E5 874 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TMEM206Q9H813 350 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PANK4Q9NVE7 773 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GNEQ9Y223 722 aaKnown RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 TRIM17Q9Y577 477 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 PCDHGA11Q9Y5H2 935 aa8.08□□□□□ -1.12
SMAD4-210ENST00000590061 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-210ENST00000590061 LCTP09848 1927 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 A0A1B0GTH6 734 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 FRMD3A2A2Y4 597 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 KIAA0391O15091 583 aaKnown RBP8.07□□□□□ -1.12
SMAD4-210ENST00000590061 EIF3DO15371 548 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMAD4-210ENST00000590061 GNA14O95837 355 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 MMP3P08254 477 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 ZNF165P49910 485 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 ZNF131P52739 623 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 SP4Q02446 784 aa8.07□□□□□ -1.12
SMAD4-210ENST00000590061 LRRC63Q05C16 580 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms