RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
RFX1-206ENST00000589760 MTMR10Q9NXD2 777 aa16.11■□□□□ 0.17
RFX1-206ENST00000589760 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
RFX1-206ENST00000589760 A0A087WWV3 80 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 A0A087WZ62 844 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 UPP2O95045 317 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 CA3P07451 260 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 DARSP14868 501 aaKnown RBP16.1■□□□□ 0.17
RFX1-206ENST00000589760 SOX11P35716 441 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 RTN4RL1Q86UN2 441 aaPredicted RBP16.1■□□□□ 0.17
RFX1-206ENST00000589760 TMEM143Q96AN5 459 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 NLRP4Q96MN2 994 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 FDXACB1Q9BRP7 624 aaPredicted RBP16.1■□□□□ 0.17
RFX1-206ENST00000589760 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 KIAA1024Q9UPX6 916 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 INSL6Q9Y581 213 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
RFX1-206ENST00000589760 TDRD15B5MCY1 1934 aaKnown RBP16.09■□□□□ 0.17
RFX1-206ENST00000589760 COL4A4P53420 1690 aaPredicted RBP16.09■□□□□ 0.17
RFX1-206ENST00000589760 ECM1Q16610 540 aa16.09■□□□□ 0.17
RFX1-206ENST00000589760 KSR1Q8IVT5 923 aa16.09■□□□□ 0.17
RFX1-206ENST00000589760 LINC01599Q8WXQ3 324 aa16.09■□□□□ 0.17
RFX1-206ENST00000589760 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
RFX1-206ENST00000589760 DDX19AQ9NUU7 478 aaKnown RBP16.09■□□□□ 0.17
RFX1-206ENST00000589760 GPSM3Q9Y4H4 160 aa16.09■□□□□ 0.17
RFX1-206ENST00000589760 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 PP2D1A8MPX8 630 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
RFX1-206ENST00000589760 FBXO45P0C2W1 286 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 ZSCAN20P17040 1043 aaPredicted RBP16.08■□□□□ 0.16
RFX1-206ENST00000589760 CDC25AP30304 524 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
RFX1-206ENST00000589760 MXD4Q14582 209 aaPredicted RBP16.08■□□□□ 0.16
RFX1-206ENST00000589760 FAM173BQ6P4H8 233 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 PRPF31Q8WWY3 499 aaKnown RBP16.08■□□□□ 0.16
RFX1-206ENST00000589760 AK8Q96MA6 479 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 ADAM2Q99965 735 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 RGS18Q9NS28 235 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 COL4A6Q14031 1691 aa16.08■□□□□ 0.16
RFX1-206ENST00000589760 TRIP11Q15643 1979 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 ARHGEF35A5YM69 484 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 MGEA5O60502 916 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 STAG3L1P0CL83 205 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 SRGAP2CP0DJJ0 459 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 SFPQP23246 707 aaKnown RBP eCLIP16.07■□□□□ 0.16
RFX1-206ENST00000589760 PTK2Q05397 1052 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 LAMTOR4Q0VGL1 99 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 GRIN2CQ14957 1233 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 KCTD17Q8N5Z5 321 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 GUCD1Q96NT3 240 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 YME1L1Q96TA2 773 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
RFX1-206ENST00000589760 NT5C3AQ9H0P0 336 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 DNM3Q9UQ16 869 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 CLIC4Q9Y696 253 aa16.07■□□□□ 0.16
RFX1-206ENST00000589760 ATG2AQ2TAZ0 1938 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 LCHNA4D1U4 455 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 E9PMD0 336 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
RFX1-206ENST00000589760 FGFR4P22455 802 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 ARL2P36404 184 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
RFX1-206ENST00000589760 SARSP49591 514 aaKnown RBP16.06■□□□□ 0.16
RFX1-206ENST00000589760 TAP1Q03518 808 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 TFDP1Q14186 410 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 DSC3Q14574 896 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 PTPAQ15257 358 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 HYIQ5T013 277 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 SLC24A5Q71RS6 500 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 CDK5RAP3Q96JB5 506 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
RFX1-206ENST00000589760 CHST12Q9NRB3 414 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 PCDHB7Q9Y5E2 793 aa16.06■□□□□ 0.16
RFX1-206ENST00000589760 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
RFX1-206ENST00000589760 C9IYK1 514 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 RNF223E7ERA6 249 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 SLC26A4O43511 780 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 EYA4O95677 639 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 ZSCAN22P10073 491 aaPredicted RBP16.05■□□□□ 0.16
RFX1-206ENST00000589760 CYP11B2P19099 503 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 UBA7P41226 1012 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 CEBPZQ03701 1054 aaKnown RBP16.05■□□□□ 0.16
RFX1-206ENST00000589760 BECN1Q14457 450 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
RFX1-206ENST00000589760 CATSPER4Q7RTX7 472 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 CABP7Q86V35 215 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 CALML4Q96GE6 196 aa16.05■□□□□ 0.16
RFX1-206ENST00000589760 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
RFX1-206ENST00000589760 USP28Q96RU2 1077 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms