RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 SEC24BO95487 1268 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 CXCL14O95715 111 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 CTSAP10619 480 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
VAT1-206ENST00000589709 AXLP30530 894 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 ARL2P36404 184 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 TXKP42681 527 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
VAT1-206ENST00000589709 ST3GAL1Q11201 340 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 TFDP1Q14186 410 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 SAFBQ15424 915 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAT1-206ENST00000589709 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
VAT1-206ENST00000589709 VPS52Q8N1B4 723 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 URGCPQ8TCY9 931 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 CCDC51Q96ER9 411 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
VAT1-206ENST00000589709 ZBP1Q9H171 429 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 C5orf42Q9H799 3197 aa13.61□□□□□ -0.23
VAT1-206ENST00000589709 WNT7AO00755 349 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 INPPL1O15357 1258 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 RARRES1P49788 294 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 ITIH3Q06033 890 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
VAT1-206ENST00000589709 LONRF3Q496Y0 759 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 TPRNQ4KMQ1 711 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 ZNF280BQ86YH2 543 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 TMEM175Q9BSA9 504 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 NFKBIZQ9BYH8 718 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 KCNH6Q9H252 994 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 RSAD1Q9HA92 442 aa13.6□□□□□ -0.23
VAT1-206ENST00000589709 BMP2KQ9NSY1 1161 aaPredicted RBP13.6□□□□□ -0.23
VAT1-206ENST00000589709 TSPAN1O60635 241 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 DDHD2O94830 711 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 ERLIN2O94905 339 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 ALDH2P05091 517 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 SLC11A1P49279 550 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 ORC2Q13416 577 aaPredicted RBP13.59□□□□□ -0.23
VAT1-206ENST00000589709 LLGL2Q6P1M3 1020 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 NOTUMQ6P988 496 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
VAT1-206ENST00000589709 BCL7CQ8WUZ0 217 aaPredicted RBP13.59□□□□□ -0.23
VAT1-206ENST00000589709 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 MFSD14AQ96MC6 490 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 NECTIN4Q96NY8 510 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 TMEM60Q9H2L4 133 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 ADAM7Q9H2U9 754 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 TUFT1Q9NNX1 390 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 DNAJB4Q9UDY4 337 aa13.59□□□□□ -0.23
VAT1-206ENST00000589709 MUC6Q6W4X9 2439 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 B4GALT3O60512 393 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 SPATA31C1P0DKV0 1188 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 ITGA4P13612 1032 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 GLRA2P23416 452 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 AFF1P51825 1210 aaKnown RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 ZXDAP98168 799 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 MBTD1Q05BQ5 628 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 CAPSQ13938 189 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 AMHR2Q16671 573 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 CES5AQ6NT32 575 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 TRIM67Q6ZTA4 783 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 HFE2Q6ZVN8 426 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 PPFIBP1Q86W92 1011 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 ASAP3Q8TDY4 903 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 CCDC43Q96MW1 224 aaKnown RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 POLR3CQ9BUI4 534 aaPredicted RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 VN1R3Q9BXE9 311 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 GBP3Q9H0R5 595 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 CSRNP2Q9H175 543 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 DZANK1Q9NVP4 752 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 DBR1Q9UK59 544 aaKnown RBP13.58□□□□□ -0.24
VAT1-206ENST00000589709 FAN1Q9Y2M0 1017 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 IPPQ9Y573 584 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 TRIOO75962 3097 aa13.58□□□□□ -0.24
VAT1-206ENST00000589709 TECTAO75443 2155 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.57□□□□□ -0.24
VAT1-206ENST00000589709 POTEMA6NI47 508 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 LILRB3O75022 631 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
VAT1-206ENST00000589709 MCM7P33993 719 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 MTHFRP42898 656 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 FOSBP53539 338 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 HMGN5P82970 282 aaKnown RBP13.57□□□□□ -0.24
VAT1-206ENST00000589709 PTPN14Q15678 1187 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 CATSPER3Q86XQ3 398 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 TMEM87AQ8NBN3 555 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 MCPH1Q8NEM0 835 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 FBXO18Q8NFZ0 1043 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 PIGOQ8TEQ8 1089 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 NACC1Q96RE7 527 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 EIF2AQ9BY44 585 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms