RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CXCL17Q6UXB2 119 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 SEPT14Q6ZU15 432 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 MCF2L2Q86YR7 1114 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 OR6J1Q8NGC5 347 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 GDF15Q99988 308 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 MRPL11Q9Y3B7 192 aaKnown RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 ABCB11O95342 1321 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 CEP290O15078 2479 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 A0A0U1RQG5 324 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-219ENST00000589349 A0A1W2PPC1 479 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 CCDC69A6NI79 296 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 FANCGO15287 622 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 ADAMTS4O75173 837 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 MYCLP12524 364 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-219ENST00000589349 PTGS1P23219 599 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 BMP8BP34820 402 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 CYP27A1Q02318 531 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 SEZ6L2Q6UXD5 910 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 CTCFLQ8NI51 663 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-219ENST00000589349 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 FGD4Q96M96 766 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 AMNQ9BXJ7 453 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 PARP14Q460N5 1801 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 PLXNA1Q9UIW2 1896 aa9.51□□□□□ -0.89
DNMT1-219ENST00000589349 SMCHD1A6NHR9 2005 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 ADCY6O43306 1168 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 F13BP05160 661 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 SNHG28P0DPA3 235 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 TXNP10599 105 aaKnown RBP9.5□□□□□ -0.89
DNMT1-219ENST00000589349 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-219ENST00000589349 GJA9P57773 515 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PSMC6P62333 389 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 SEPT6Q14141 434 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PPP2R5BQ15173 497 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PPM1JQ5JR12 505 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 SYNE3Q6ZMZ3 975 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 C12orf40Q86WS4 652 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 RELL1Q8IUW5 271 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.5□□□□□ -0.89
DNMT1-219ENST00000589349 KCT2Q8NC54 265 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PHC3Q8NDX5 983 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 KLHDC9Q8NEP7 349 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 NSUN6Q8TEA1 469 aaKnown RBP9.5□□□□□ -0.89
DNMT1-219ENST00000589349 ANKS1AQ92625 1134 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 ISL2Q96A47 359 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 RMDN3Q96TC7 470 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 MYL10Q9BUA6 226 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 JMJD4Q9H9V9 463 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PDLIM7Q9NR12 457 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 PCDHA1Q9Y5I3 950 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 MROH7Q68CQ1 1323 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 WDR19Q8NEZ3 1342 aa9.5□□□□□ -0.89
DNMT1-219ENST00000589349 TRIM43BA6NCK2 446 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 ARVCFO00192 962 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 PRC1O43663 620 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TGFB1P01137 390 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 HOXA13P31271 388 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-219ENST00000589349 KIF5BP33176 963 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 MCM5P33992 734 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 CPT1AP50416 773 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 PTPN11Q06124 597 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-219ENST00000589349 RING1Q06587 406 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TRAF1Q13077 416 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 ITGA7Q13683 1181 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 LRP8Q14114 963 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TMEM63BQ5T3F8 832 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 LRFN4Q6PJG9 635 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 SCFD2Q8WU76 684 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TBC1D5Q92609 795 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 MAP4K1Q92918 833 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TRIM43Q96BQ3 446 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-219ENST00000589349 PLPPR2Q96GM1 343 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 RNPC3Q96LT9 517 aaKnown RBP9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TAAR1Q96RJ0 339 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 PIGSQ96S52 555 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 LRRC2Q9BYS8 371 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 C1GALT1Q9NS00 363 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 SEC63Q9UGP8 760 aaKnown RBP9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TAF6LQ9Y6J9 622 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 TRIOBPQ9H2D6 2365 aa9.49□□□□□ -0.89
DNMT1-219ENST00000589349 GCOM1H8Y6P7 765 aaPredicted RBP9.48□□□□□ -0.89
DNMT1-219ENST00000589349 SLC27A2O14975 620 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ZBTB5O15062 677 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 CABYRO75952 493 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 POLR2MP0CAP2 368 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 ADMP35318 185 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 FPGSQ05932 587 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 GRM4Q14833 912 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 SEC23AQ15436 765 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 SHHQ15465 462 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 STXBP2Q15833 593 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 DUSP28Q4G0W2 176 aa9.48□□□□□ -0.89
DNMT1-219ENST00000589349 WIPI1Q5MNZ9 446 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms