RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 PKP1Q13835 747 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 COL19A1Q14993 1142 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 FOXD4L6Q3SYB3 417 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-209ENST00000589214 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 ARL6IP4Q66PJ3 421 aaKnown RBP16.85■□□□□ 0.29
ERCC1-209ENST00000589214 FOXD4L3Q6VB84 417 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-209ENST00000589214 MICAL1Q8TDZ2 1067 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 PGBD4Q96DM1 585 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 EIF2AQ9BY44 585 aaKnown RBP16.85■□□□□ 0.29
ERCC1-209ENST00000589214 BHMT2Q9H2M3 363 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 MYO7AQ13402 2215 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 BRWD1Q9NSI6 2320 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 VCANP13611 3396 aa16.85■□□□□ 0.29
ERCC1-209ENST00000589214 B4GALT5O43286 388 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 ZNF623O75123 536 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 TBX10O75333 385 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 NRIP1P48552 1158 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 PTPAQ15257 358 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 AMHR2Q16671 573 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 NOMO2Q5JPE7 1267 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 AGMOQ6ZNB7 445 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 USP28Q96RU2 1077 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 NFKBIZQ9BYH8 718 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 GBP3Q9H0R5 595 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 ZSCAN16Q9H4T2 348 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 SPG21Q9NZD8 308 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 TFIP11Q9UBB9 837 aaKnown RBP16.84■□□□□ 0.29
ERCC1-209ENST00000589214 STK24Q9Y6E0 443 aa16.84■□□□□ 0.29
ERCC1-209ENST00000589214 NT5C1B-RDH14C9J2C7 533 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 NCK2O43639 380 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 OFD1O75665 1012 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 IL9P15248 144 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 ARF4P18085 180 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 CYP11B2P19099 503 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 AXLP30530 894 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 BCAR1P56945 870 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 ERVFC1P60507 584 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 PLCB3Q01970 1234 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 RNASELQ05823 741 aaKnown RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 CLUL1Q15846 466 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 PTCRAQ6ISU1 281 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 CABP7Q86V35 215 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 CDR2LQ86X02 465 aaPredicted RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 ZBTB8OSQ8IWT0 167 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 SMG8Q8ND04 991 aaKnown RBP16.83■□□□□ 0.28
ERCC1-209ENST00000589214 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 CCDC51Q96ER9 411 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 TCF25Q9BQ70 676 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 APOL6Q9BWW8 343 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 DNM3Q9UQ16 869 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 IPPQ9Y573 584 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 A0A0C4DFX4 3053 aa16.83■□□□□ 0.28
ERCC1-209ENST00000589214 XIRP2A4UGR9 3374 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 CNTNAP2Q9UHC6 1331 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 BMP15O95972 392 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 ITGA4P13612 1032 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 NCLP19338 710 aaKnown RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 LTBRP36941 435 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 NDUFV1P49821 464 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 DLX2Q07687 328 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 CTC1Q2NKJ3 1217 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 SPECC1Q5M775 1068 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 CDCA2Q69YH5 1023 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 MRPL10Q7Z7H8 261 aaKnown RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 TMEM173Q86WV6 379 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 DEPTORQ8TB45 409 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 CLIC6Q96NY7 704 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 TRIM6Q9C030 488 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 CSRNP2Q9H175 543 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 NRDE2Q9H7Z3 1164 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 DAXXQ9UER7 740 aaPredicted RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 LZTS1Q9Y250 596 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 HES2Q9Y543 173 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 MYH11P35749 1972 aa16.82■□□□□ 0.28
ERCC1-209ENST00000589214 SPTBN5Q9NRC6 3674 aaKnown RBP16.82■□□□□ 0.28
ERCC1-209ENST00000589214 FSCN2O14926 492 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 PER2O15055 1255 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 B4GALT3O60512 393 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 NPTXRO95502 500 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 EYA4O95677 639 aa16.81■□□□□ 0.28
ERCC1-209ENST00000589214 SSBP05455 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms