RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 SERPINB2P05120 415 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 FESP07332 822 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 USP46P62068 366 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 NAB2Q15742 525 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 TRPM8Q7Z2W7 1104 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 APBB1IPQ7Z5R6 666 aaPredicted RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SIX5Q8N196 739 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 VPS52Q8N1B4 723 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 PFDN4Q9NQP4 134 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 CTTNBP2NLQ9P2B4 639 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SPATA31A5Q5VU36 1347 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SPATA31A7Q8IWB4 1347 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 PGRMC1O00264 195 aaKnown RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 ACSL3O95573 720 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 LINGO3P0C6S8 592 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 FUT4P22083 530 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 BTKQ06187 659 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 CDC37Q16543 378 aaPredicted RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 IQCKQ8N0W5 287 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SH3GL2Q99962 352 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 MTA3Q9BTC8 594 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 UTP11Q9Y3A2 253 aaKnown RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SHOX2O60902 331 aaPredicted RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 CFBP00751 764 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 NQO1P15559 274 aaKnown RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 PLCG2P16885 1265 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 GSTT1P30711 240 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 KDM7AQ6ZMT4 941 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 PURBQ96QR8 312 aaKnown RBP13.09□□□□□ -0.31
LRFN3-204ENST00000588831 TAS2R14Q9NYV8 317 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 TISP43B9A030 160 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 AKAP3O75969 853 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 PDE6CP51160 858 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 GPSM2P81274 684 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 LRRC63Q05C16 580 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 LRRC8CQ8TDW0 803 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 HAS1Q92839 578 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 DDX18Q9NVP1 670 aaKnown RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 SLIT2O94813 1529 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 STAMBPO95630 424 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 GALCP54803 685 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 IFI35P80217 286 aaPredicted RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 IFI16Q16666 785 aaKnown RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 NCAPG2Q86XI2 1143 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 PALB2Q86YC2 1186 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 REEP2Q9BRK0 252 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 JMJD4Q9H9V9 463 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 M0R2N6 131 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 PPP1R11O60927 126 aaPredicted RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 SP4Q02446 784 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 PHC3Q8NDX5 983 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 DTNBP1Q96EV8 351 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 RAB3IPQ96QF0 476 aaPredicted RBP13.08□□□□□ -0.32
LRFN3-204ENST00000588831 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 PPP1R9AQ9ULJ8 1098 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 DAAM1Q9Y4D1 1078 aa13.08□□□□□ -0.32
LRFN3-204ENST00000588831 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CCNFP41002 786 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 BLMHQ13867 455 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 EPC2Q52LR7 807 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 DAB2IPQ5VWQ8 1189 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CCDC174Q6PII3 467 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
LRFN3-204ENST00000588831 PRMT1Q99873 361 aaKnown RBP13.07□□□□□ -0.32
LRFN3-204ENST00000588831 LAD1O00515 517 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 YY1P25490 414 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 MAGEA8P43361 318 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 C16orf87Q6PH81 154 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 SAPCD2Q86UD0 394 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 COQ9O75208 318 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 FAM13AO94988 1023 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 TNFAIP3P21580 790 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CBX3Q13185 183 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CDCA2Q69YH5 1023 aaPredicted RBP13.07□□□□□ -0.32
LRFN3-204ENST00000588831 CCNJLQ8IV13 435 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms