RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 CEP135Q66GS9 1140 aa33.95■■■■□ 3.03
CAPNS1-206ENST00000588815 SLFN12LQ6IEE8 588 aa33.95■■■■□ 3.03
CAPNS1-206ENST00000588815 VSTM4Q8IW00 320 aa33.95■■■■□ 3.03
CAPNS1-206ENST00000588815 TRIM59Q8IWR1 403 aa33.95■■■■□ 3.03
CAPNS1-206ENST00000588815 NLRP4Q96MN2 994 aa33.95■■■■□ 3.03
CAPNS1-206ENST00000588815 MOXD2PA6NHM9 499 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 AKAP3O75969 853 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 RPLP2P05387 115 aaKnown RBP33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 CYP2C9P11712 490 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 LIG4P49917 911 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 LHX8Q68G74 356 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 XXYLT1Q8NBI6 393 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 IKZF4Q9H2S9 585 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 STYXL1Q9Y6J8 313 aa33.95■■■■□ 3.02
CAPNS1-206ENST00000588815 EXOC3O60645 756 aa33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 VWA3BQ502W6 1294 aa33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 ZBTB10Q96DT7 871 aa33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 MRPL4Q9BYD3 311 aaKnown RBP33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 HSPBP1Q9NZL4 362 aa33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 GTF2IRD1Q9UHL9 959 aa33.94■■■■□ 3.02
CAPNS1-206ENST00000588815 CYP2J2P51589 502 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 FAM187BQ17R55 369 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 NBPF20Q3BBV1 942 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 MIIPQ5JXC2 388 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 TAF2Q6P1X5 1199 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 FAM186BQ8IYM0 893 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 NME8Q8N427 588 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 ARRDC4Q8NCT1 418 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 FZD8Q9H461 694 aa33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 PRMT7Q9NVM4 692 aaPredicted RBP33.93■■■■□ 3.02
CAPNS1-206ENST00000588815 ITIH6Q6UXX5 1313 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 A0A1W2PQC6 194 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 PRKCBP05771 671 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 PBX1P40424 430 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 GPC3P51654 580 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 CBWD1Q9BRT8 395 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 NDST4Q9H3R1 872 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 IFT122Q9HBG6 1241 aa33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP33.92■■■■□ 3.02
CAPNS1-206ENST00000588815 ANKRD63C9JTQ0 380 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 PTMAP06454 111 aaKnown RBP33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 GJB1P08034 283 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 CASP4P49662 377 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 UBXN1Q04323 297 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 PTPN11Q06124 597 aaPredicted RBP33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 FKBP15Q5T1M5 1219 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 SPECC1LQ69YQ0 1117 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 SLC39A4Q6P5W5 647 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 SRGAP1Q7Z6B7 1085 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 SPC24Q8NBT2 197 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 POMGNT1Q8WZA1 660 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 PRIMPOLQ96LW4 560 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 KIAA1586Q9HCI6 787 aa33.91■■■■□ 3.02
CAPNS1-206ENST00000588815 ACKR2O00590 384 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 TEX33O43247 280 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 VTNP04004 478 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 ADSSP30520 456 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 PCBP1Q15365 356 aaKnown RBP eCLIP33.9■■■■□ 3.022e-8■■□□□ 14
CAPNS1-206ENST00000588815 SLC9C1Q4G0N8 1177 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 TMC6Q7Z403 805 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 BORCS6Q96GS4 357 aa33.9■■■■□ 3.02
CAPNS1-206ENST00000588815 A0A087WZ62 844 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 TREHO43280 583 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 MBTD1Q05BQ5 628 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 ENPEPQ07075 957 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 HS1BP3Q53T59 392 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 INTS8Q75QN2 995 aaKnown RBP33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 SH3TC2Q8TF17 1288 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 FBXL18Q96ME1 805 aa33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 FDXACB1Q9BRP7 624 aaPredicted RBP33.89■■■■□ 3.02
CAPNS1-206ENST00000588815 TISP43B9A030 160 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 INO80B-WBP1J3KQ70 363 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 PES1O00541 588 aaKnown RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 LDHAP00338 332 aaKnown RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 ACLYP53396 1101 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 NLRP11P59045 1033 aaKnown RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 HIC1Q14526 733 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 NLRP7Q8WX94 980 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 INO80BQ9C086 356 aaPredicted RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 TOM1L1O75674 476 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 GSDMDP57764 484 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 MCCD1P59942 119 aaPredicted RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 TRIM44Q96DX7 344 aaPredicted RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 ERGIC2Q96RQ1 377 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 TARS2Q9BW92 718 aaKnown RBP33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 PCIF1Q9H4Z3 704 aa33.88■■■■□ 3.01
CAPNS1-206ENST00000588815 MYCNP04198 464 aaPredicted RBP33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 GPD1LQ8N335 351 aa33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 GLT1D1Q96MS3 346 aa33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 SCLT1Q96NL6 688 aa33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 ACO2Q99798 780 aaKnown RBP33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 FAM49AQ9H0Q0 323 aaPredicted RBP33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 PAK6Q9NQU5 681 aaPredicted RBP33.87■■■■□ 3.01
CAPNS1-206ENST00000588815 KRT13P13646 458 aa33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 PRPF4BQ13523 1007 aaKnown RBP33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 RUFY4Q6ZNE9 571 aa33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 CTU1Q7Z7A3 348 aaKnown RBP33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 SEZ6LQ9BYH1 1024 aa33.86■■■■□ 3.01
CAPNS1-206ENST00000588815 GCOM2Q9BZD3 368 aaPredicted RBP33.86■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms