RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
ERCC1-207ENST00000588738 FAM187BQ17R55 369 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 DAW1Q8N136 415 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 GDPD5Q8WTR4 605 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 RSPH1Q8WYR4 309 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 LARP4BQ92615 738 aaKnown RBP20.76■□□□□ 0.91
ERCC1-207ENST00000588738 CASD1Q96PB1 797 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 KCNG1Q9UIX4 513 aa20.76■□□□□ 0.91
ERCC1-207ENST00000588738 C5orf67F2Z3F1 127 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 H3BNC9 293 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 LPXNO60711 386 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 NPTX2P47972 431 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 MAPK7Q13164 816 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 MCM6Q14566 821 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 ARSHQ5FYA8 562 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 UBXN11Q5T124 520 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 SPOUT1Q5T280 376 aaKnown RBP20.75■□□□□ 0.91
ERCC1-207ENST00000588738 RRAGBQ5VZM2 374 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 GPBP1Q86WP2 473 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 CNNM3Q8NE01 707 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 KCNG4Q8TDN1 519 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 C11orf84Q9BUA3 381 aaPredicted RBP20.75■□□□□ 0.91
ERCC1-207ENST00000588738 PLVAPQ9BX97 442 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 RNF19AQ9NV58 838 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 LMCD1Q9NZU5 365 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 STK17AQ9UEE5 414 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 RBM19Q9Y4C8 960 aaKnown RBP20.75■□□□□ 0.91
ERCC1-207ENST00000588738 EYSQ5T1H1 3165 aa20.75■□□□□ 0.91
ERCC1-207ENST00000588738 A0A1B0GUA9 196 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 SFI1A8K8P3 1242 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 K7ERI5 159 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 ACKR2O00590 384 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 B4GALT5O43286 388 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 PRKCBP05771 671 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 LIG1P18858 919 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 DNM1Q05193 864 aaKnown RBP20.74■□□□□ 0.91
ERCC1-207ENST00000588738 GPM6BQ13491 265 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 PRPF4BQ13523 1007 aaKnown RBP20.74■□□□□ 0.91
ERCC1-207ENST00000588738 TMEM132AQ24JP5 1023 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 LONRF3Q496Y0 759 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 CLLU1OSQ5K130 101 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 SLC27A1Q6PCB7 646 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 GLB1LQ6UWU2 654 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 CCDC73Q6ZRK6 1079 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 MRPL10Q7Z7H8 261 aaKnown RBP20.74■□□□□ 0.91
ERCC1-207ENST00000588738 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 LRRC15Q8TF66 581 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 LPPQ93052 612 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 KIFC3Q9BVG8 833 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 TRIM6Q9C030 488 aaPredicted RBP20.74■□□□□ 0.91
ERCC1-207ENST00000588738 CCDC113Q9H0I3 377 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 KMT5AQ9NQR1 393 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 AAASQ9NRG9 546 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 TYW1Q9NV66 732 aaKnown RBP20.74■□□□□ 0.91
ERCC1-207ENST00000588738 ODF2LQ9ULJ1 636 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 ZDHHC9Q9Y397 364 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 ATP6V1DQ9Y5K8 247 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 MTCH2Q9Y6C9 303 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 CNTNAP2Q9UHC6 1331 aa20.74■□□□□ 0.91
ERCC1-207ENST00000588738 CUTAO60888 179 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 KRT18P05783 430 aaKnown RBP20.73■□□□□ 0.91
ERCC1-207ENST00000588738 PLS3P13797 630 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 NCLP19338 710 aaKnown RBP20.73■□□□□ 0.91
ERCC1-207ENST00000588738 SMTNP53814 917 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 NAALADL2Q58DX5 795 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 LRRC43Q8N309 656 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 NTPCRQ9BSD7 190 aaKnown RBP20.73■□□□□ 0.91
ERCC1-207ENST00000588738 MRPL9Q9BYD2 267 aaKnown RBP20.73■□□□□ 0.91
ERCC1-207ENST00000588738 LARSQ9P2J5 1176 aaKnown RBP20.73■□□□□ 0.91
ERCC1-207ENST00000588738 PCDHB12Q9Y5F1 795 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 PHLPP2Q6ZVD8 1323 aa20.73■□□□□ 0.91
ERCC1-207ENST00000588738 NPHP3-ACAD11A0A0J9YXS1 232 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 ME1P48163 572 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 HACE1Q8IYU2 909 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 SPIRE2Q8WWL2 714 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 P2RX5Q93086 422 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 REEP2Q9BRK0 252 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 EIF2AQ9BY44 585 aaKnown RBP20.72■□□□□ 0.91
ERCC1-207ENST00000588738 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 TMEM134Q9H6X4 195 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 CWH43Q9H720 699 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 UBN1Q9NPG3 1134 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 RCOR1Q9UKL0 485 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 IPPQ9Y573 584 aa20.72■□□□□ 0.91
ERCC1-207ENST00000588738 N4BP3O15049 544 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 ITGA4P13612 1032 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 LAG3P18627 525 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 STAT6P42226 847 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 CACNB1Q02641 598 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-207ENST00000588738 PTPROQ16827 1216 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 AGMOQ6ZNB7 445 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 LRRC55Q6ZSA7 311 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 SV2BQ7L1I2 683 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 CDR2LQ86X02 465 aaPredicted RBP20.71■□□□□ 0.91
ERCC1-207ENST00000588738 MICALL1Q8N3F8 863 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 SMG8Q8ND04 991 aaKnown RBP20.71■□□□□ 0.91
ERCC1-207ENST00000588738 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 RSAD1Q9HA92 442 aa20.71■□□□□ 0.91
ERCC1-207ENST00000588738 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms