RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 INPPL1O15357 1258 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 STBD1O95210 358 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 POMCP01189 267 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 RCAN1P53805 252 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 AK2P54819 239 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 CMASQ8NFW8 434 aaPredicted RBP17.16■□□□□ 0.34
IFT20-216ENST00000588477 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 STAMQ92783 540 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 TBC1D17Q9HA65 648 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 RSAD1Q9HA92 442 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 WDR6Q9NNW5 1121 aaKnown RBP17.16■□□□□ 0.34
IFT20-216ENST00000588477 ARID2Q68CP9 1835 aa17.16■□□□□ 0.34
IFT20-216ENST00000588477 PATJQ8NI35 1801 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 CCDC196A0A1B0GTZ2 297 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 DDX11L8A8MPP1 907 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 PRPF3O43395 683 aaKnown RBP17.15■□□□□ 0.34
IFT20-216ENST00000588477 MAFO75444 373 aaPredicted RBP17.15■□□□□ 0.34
IFT20-216ENST00000588477 PSMD10O75832 226 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 SOD2P04179 222 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 URODP06132 367 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 ADH1AP07327 375 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 DCNP07585 359 aaKnown RBP17.15■□□□□ 0.34
IFT20-216ENST00000588477 USP11P51784 963 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 FGD1P98174 961 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 TAS1R1Q7RTX1 841 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 RASEFQ8IZ41 740 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 GPR152Q8TDT2 470 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 PHKBQ93100 1093 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 MYADMQ96S97 322 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 KANSL3Q9P2N6 904 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 CLUHO75153 1309 aa17.15■□□□□ 0.34
IFT20-216ENST00000588477 TEX28O15482 410 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 RFPL2O75678 378 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 SRFP11831 508 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 MRPL10Q7Z7H8 261 aaKnown RBP17.14■□□□□ 0.33
IFT20-216ENST00000588477 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 SMG7Q92540 1137 aaKnown RBP17.14■□□□□ 0.33
IFT20-216ENST00000588477 YTHDC1Q96MU7 727 aaKnown RBP17.14■□□□□ 0.33
IFT20-216ENST00000588477 RPS6KC1Q96S38 1066 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 AGPAT5Q9NUQ2 364 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 DPP7Q9UHL4 492 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 PRG3Q9Y2Y8 225 aaPredicted RBP17.14■□□□□ 0.33
IFT20-216ENST00000588477 SIT1Q9Y3P8 196 aa17.14■□□□□ 0.33
IFT20-216ENST00000588477 GLUD1P00367 558 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 SPATA31D3P0C874 917 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 SP9P0CG40 484 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 AKAP17AQ02040 695 aaKnown RBP17.13■□□□□ 0.33
IFT20-216ENST00000588477 TSGA10IPQ3SY00 556 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 ZC3H14Q6PJT7 736 aaKnown RBP17.13■□□□□ 0.33
IFT20-216ENST00000588477 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 SPATA31D4Q6ZUB0 917 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 DCLK2Q8N568 766 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 NXPE3Q969Y0 559 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 HERC2P3Q9BVR0 1158 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 MARCH5Q9NX47 278 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 CNTNAP2Q9UHC6 1331 aa17.13■□□□□ 0.33
IFT20-216ENST00000588477 CPA1P15085 419 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 OR1G1P47890 313 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 GLUD2P49448 558 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 PUM1Q14671 1186 aaKnown RBP eCLIP17.12■□□□□ 0.33
IFT20-216ENST00000588477 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 PHLDB3Q6NSJ2 640 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 Q6ZUG5 572 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 ANO5Q75V66 913 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 C1orf210Q8IVY1 113 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
IFT20-216ENST00000588477 CCDC148Q8NFR7 591 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
IFT20-216ENST00000588477 RHOBTB2Q9BYZ6 727 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 PIDD1Q9HB75 910 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 DLGAP2Q9P1A6 1054 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
IFT20-216ENST00000588477 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 LAMP2P13473 410 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 KRT32Q14532 448 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 Q4G0T1 1027 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 B3GNT9Q6UX72 402 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 COLGALT2Q8IYK4 626 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 RUBCNQ92622 972 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 BRF1Q92994 677 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 ZNF707Q96C28 371 aaPredicted RBP17.11■□□□□ 0.33
IFT20-216ENST00000588477 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 RXFP1Q9HBX9 757 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 ARHGEF3Q9NR81 526 aa17.11■□□□□ 0.33
IFT20-216ENST00000588477 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 TDP2O95551 362 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 HMGB1P09429 215 aaKnown RBP17.1■□□□□ 0.33
IFT20-216ENST00000588477 ITGA4P13612 1032 aa17.1■□□□□ 0.33
IFT20-216ENST00000588477 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms