RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 RNF169Q8NCN4 708 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 EPSTI1Q96J88 318 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 CASD1Q96PB1 797 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 LMAN2LQ9H0V9 348 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 TMEM134Q9H6X4 195 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 KANSL3Q9P2N6 904 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
TPM4-207ENST00000588032 STK17AQ9UEE5 414 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 ODF2LQ9ULJ1 636 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 ATP6V1DQ9Y5K8 247 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 MTCH2Q9Y6C9 303 aa11.16□□□□□ -0.62
TPM4-207ENST00000588032 CCDC169A6NNP5 214 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 H0YCG3 227 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 K7ERI5 159 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 ATF7P17544 494 aaPredicted RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 LAG3P18627 525 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 PLCG1P19174 1290 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 NPTX2P47972 431 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 GATMP50440 423 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 PEX3P56589 373 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 PRPF4BQ13523 1007 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 KARSQ15046 597 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 SPOUT1Q5T280 376 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 FOXD4L5Q5VV16 416 aaPredicted RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 CCDC73Q6ZRK6 1079 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 APBB1IPQ7Z5R6 666 aaPredicted RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 SPRED2Q7Z698 418 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 DAW1Q8N136 415 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 LRRC43Q8N309 656 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 KCNG4Q8TDN1 519 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 FOXD4L4Q8WXT5 416 aaPredicted RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 LARP4BQ92615 738 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 RAD54LQ92698 747 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 MRPL38Q96DV4 380 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 CLIC6Q96NY7 704 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 CCDC113Q9H0I3 377 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 KMT5AQ9NQR1 393 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 BLOC1S4Q9NUP1 217 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 RNF19AQ9NV58 838 aa11.15□□□□□ -0.62
TPM4-207ENST00000588032 TYW1Q9NV66 732 aaKnown RBP11.15□□□□□ -0.62
TPM4-207ENST00000588032 N4BP3O15049 544 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 CUTAO60888 179 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 OFD1O75665 1012 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 BRD1O95696 1058 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 PRKCBP05771 671 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 ITGA4P13612 1032 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 PLS3P13797 630 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 ABCD1P33897 745 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 UBE3AQ05086 875 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 MAPK7Q13164 816 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 PKP1Q13835 747 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 ARSHQ5FYA8 562 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 NOMO2Q5JPE7 1267 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 CLLU1OSQ5K130 101 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 SPECC1Q5M775 1068 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 USP49Q70CQ1 688 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 URGCPQ8TCY9 931 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 CPB2Q96IY4 423 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 RSAD1Q9HA92 442 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 IPPQ9Y573 584 aa11.14□□□□□ -0.63
TPM4-207ENST00000588032 B4GALT5O43286 388 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 KRT18P05783 430 aaKnown RBP11.13□□□□□ -0.63
TPM4-207ENST00000588032 PPM1AP35813 382 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 ALDH7A1P49419 539 aaKnown RBP11.13□□□□□ -0.63
TPM4-207ENST00000588032 MCM6Q14566 821 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 AGMOQ6ZNB7 445 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 LRRC55Q6ZSA7 311 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 KLHL23Q8NBE8 558 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 COLGALT1Q8NBJ5 622 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 SMG8Q8ND04 991 aaKnown RBP11.13□□□□□ -0.63
TPM4-207ENST00000588032 SLC17A8Q8NDX2 589 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 KCNN1Q92952 543 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 ZNF558Q96NG5 402 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
TPM4-207ENST00000588032 LRRC27Q9C0I9 530 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 CWH43Q9H720 699 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 POLD4Q9HCU8 107 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 PUF60Q9UHX1 559 aaKnown RBP11.13□□□□□ -0.63
TPM4-207ENST00000588032 RCOR1Q9UKL0 485 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
TPM4-207ENST00000588032 LAMA3Q16787 3333 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms