RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 GCLCP48506 637 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 HSD17B4P51659 736 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 MARSP56192 900 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 SOX10P56693 466 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 ERVK-24P63145 666 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 GABPB1Q06547 395 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 MTF1Q14872 753 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 BRD3Q15059 726 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SPA17Q15506 151 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 PKN2Q16513 984 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 UBE2SQ16763 222 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 ERCC6LQ2NKX8 1250 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 EDRF1Q3B7T1 1238 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 USH1GQ495M9 461 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 ZNF569Q5MCW4 686 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 FAM26FQ5R3K3 315 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 COX20Q5RI15 118 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 CCDC174Q6PII3 467 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 USP17L6PQ6QN14 398 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 RSRC2Q7L4I2 434 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 KRT222Q8N1A0 295 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 KIAA0895Q8NCT3 520 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SH3TC2Q8TF17 1288 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 LRRC15Q8TF66 581 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 CRYGNQ8WXF5 182 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SYN2Q92777 582 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 DNAJC19Q96DA6 116 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 TRERF1Q96PN7 1200 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 IWS1Q96ST2 819 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 INSM2Q96T92 566 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 MPHOSPH6Q99547 160 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 DESI2Q9BSY9 194 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 POLR3CQ9BUI4 534 aaPredicted RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 CARD6Q9BX69 1037 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 TEX13BQ9BXU2 312 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 NIFKQ9BYG3 293 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 TTYH3Q9C0H2 523 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 GBP3Q9H0R5 595 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 NDST4Q9H3R1 872 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SEMA6BQ9H3T3 888 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 MRPL44Q9H9J2 332 aaKnown RBP6.31□□□□□ -1.4
SDF2-206ENST00000587788 LZTFL1Q9NQ48 299 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
SDF2-206ENST00000587788 PANK4Q9NVE7 773 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 SRRDQ9UH36 339 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 LRFN2Q9ULH4 789 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 DNM3Q9UQ16 869 aa6.31□□□□□ -1.4
SDF2-206ENST00000587788 ZNF536O15090 1300 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 BAZ2BQ9UIF8 2168 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 LOC102724159A0A0B4J2E5 919 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ANO9A1A5B4 782 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 FRMD3A2A2Y4 597 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CTAGE15A4D2H0 777 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 TNPO2O14787 897 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 STRNO43815 780 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 EDIL3O43854 480 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ERLIN1O75477 346 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 LCA5LO95447 670 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 KRT18P05783 430 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 PLA2G4BP0C869 781 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CTAGE8P0CG41 777 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 FCER1AP12319 257 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ALAS1P13196 640 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 IDEP14735 1019 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ELNP15502 786 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 GAP43P17677 238 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ERCC3P19447 782 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ANXA13P27216 316 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 RPA1P27694 616 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CTSOP43234 321 aaPredicted RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 FLT3LGP49771 235 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 FCGRTP55899 365 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 SNAP25P60880 206 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CKAP4Q07065 602 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 KIF5AQ12840 1032 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 KIF22Q14807 665 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 PWP2Q15269 919 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 MIIPQ5JXC2 388 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 C1orf53Q5VUE5 145 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 IQCEQ6IPM2 695 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 MRPL14Q6P1L8 145 aaKnown RBP6.3□□□□□ -1.4
SDF2-206ENST00000587788 FBXO38Q6PIJ6 1188 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 RNF207Q6ZRF8 634 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 NIPA1Q7RTP0 329 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 DYMQ7RTS9 669 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 KIAA1328Q86T90 577 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 CTAGE6Q86UF2 777 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 GPBP1Q86WP2 473 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 RIOX2Q8IUF8 465 aa6.3□□□□□ -1.4
SDF2-206ENST00000587788 FMNL3Q8IVF7 1028 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 681.4 ms