RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SART3Q15020 963 aaKnown RBP6.03□□□□□ -1.44
VMP1-205ENST00000587470 PCBP1Q15365 356 aaKnown RBP eCLIP6.03□□□□□ -1.44
VMP1-205ENST00000587470 IGFL4Q6B9Z1 124 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 DHX37Q8IY37 1157 aaKnown RBP6.03□□□□□ -1.44
VMP1-205ENST00000587470 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 PLAAQ9Y263 795 aa6.03□□□□□ -1.44
VMP1-205ENST00000587470 EPRSP07814 1512 aaKnown RBP6.03□□□□□ -1.44
VMP1-205ENST00000587470 MYPNQ86TC9 1320 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 MTSS1O43312 755 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 TGM5O43548 720 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 OCRLQ01968 901 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 TUBA3CQ13748 450 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 ELAVL1Q15717 326 aaKnown RBP6.02□□□□□ -1.45
VMP1-205ENST00000587470 GPR158Q5T848 1215 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 MFSD5Q6N075 450 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 TUBA3EQ6PEY2 450 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 ESPNLQ6ZVH7 1005 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 CMTM4Q8IZR5 234 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 UIMC1Q96RL1 719 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 FEZ1Q99689 392 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 CEP72Q9P209 647 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 MRPL42Q9Y6G3 142 aaKnown RBP6.02□□□□□ -1.45
VMP1-205ENST00000587470 PRXQ9BXM0 1461 aa6.02□□□□□ -1.45
VMP1-205ENST00000587470 ARID4BQ4LE39 1312 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 TTBK1Q5TCY1 1321 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 ELL2O00472 640 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 CNGB1Q14028 1251 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 FHL2Q14192 279 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 DALRD3Q5D0E6 543 aaKnown RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 FKBP15Q5T1M5 1219 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 ZNF662Q6ZS27 426 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 PPP1R14CQ8TAE6 165 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 ZNF496Q96IT1 587 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 SOX7Q9BT81 388 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 MENTQ9BUN1 341 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.01□□□□□ -1.45
VMP1-205ENST00000587470 MSRAQ9UJ68 235 aa6.01□□□□□ -1.45
VMP1-205ENST00000587470 ING1Q9UK53 422 aaPredicted RBP6.01□□□□□ -1.45
VMP1-205ENST00000587470 MFAP3LO75121 409 aa6□□□□□ -1.45
VMP1-205ENST00000587470 PCDH8O95206 1070 aa6□□□□□ -1.45
VMP1-205ENST00000587470 PEX11BO96011 259 aa6□□□□□ -1.45
VMP1-205ENST00000587470 LSP1P33241 339 aa6□□□□□ -1.45
VMP1-205ENST00000587470 MAN2A2P49641 1150 aa6□□□□□ -1.45
VMP1-205ENST00000587470 SCNN1GP51170 649 aa6□□□□□ -1.45
VMP1-205ENST00000587470 TGFB2P61812 414 aa6□□□□□ -1.45
VMP1-205ENST00000587470 PHC1P78364 1004 aa6□□□□□ -1.45
VMP1-205ENST00000587470 FAM9AQ8IZU1 332 aaPredicted RBP6□□□□□ -1.45
VMP1-205ENST00000587470 CDYL2Q8N8U2 506 aa6□□□□□ -1.45
VMP1-205ENST00000587470 ZNF610Q8N9Z0 462 aa6□□□□□ -1.45
VMP1-205ENST00000587470 ARL8AQ96BM9 186 aa6□□□□□ -1.45
VMP1-205ENST00000587470 MFSD3Q96ES6 412 aa6□□□□□ -1.45
VMP1-205ENST00000587470 GPR101Q96P66 508 aaPredicted RBP6□□□□□ -1.45
VMP1-205ENST00000587470 TARS2Q9BW92 718 aaKnown RBP6□□□□□ -1.45
VMP1-205ENST00000587470 NCDNQ9UBB6 729 aa6□□□□□ -1.45
VMP1-205ENST00000587470 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
VMP1-205ENST00000587470 RAPGEF2Q9Y4G8 1499 aa6□□□□□ -1.45
VMP1-205ENST00000587470 EEA1Q15075 1411 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 CUL7Q14999 1698 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 ST20-MTHFSA0A0A6YYL1 179 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 GAAP10253 952 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 NPEPPSP55786 919 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 SPIDRQ14159 915 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 SEPT7Q16181 437 aaKnown RBP5.99□□□□□ -1.45
VMP1-205ENST00000587470 FNDC7Q5VTL7 733 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 Q6ZRM9 215 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 KIAA0907Q7Z7F0 614 aaPredicted RBP5.99□□□□□ -1.45
VMP1-205ENST00000587470 JAZF1Q86VZ6 243 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 AMER2Q8N7J2 671 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 OR2W6PQ8NHA6 318 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 FERMT2Q96AC1 680 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 ZNF512Q96ME7 567 aaPredicted RBP5.99□□□□□ -1.45
VMP1-205ENST00000587470 SPTLC3Q9NUV7 552 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 YEATS2Q9ULM3 1422 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 XDHP47989 1333 aa5.99□□□□□ -1.45
VMP1-205ENST00000587470 IQSEC2Q5JU85 1478 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 IPO13O94829 963 aaKnown RBP5.98□□□□□ -1.45
VMP1-205ENST00000587470 MAKP20794 623 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 LSSP48449 732 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 GPR15P49685 360 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 CD69Q07108 199 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 C11orf74Q86VG3 221 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 UNC5BQ8IZJ1 945 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 GPR87Q9BY21 358 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 SLITRK6Q9H5Y7 841 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 CD109Q6YHK3 1445 aa5.98□□□□□ -1.45
VMP1-205ENST00000587470 UHRF1BP1LA0JNW5 1464 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 BCORL1Q5H9F3 1711 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 TNIKQ9UKE5 1360 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 MADDQ8WXG6 1647 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 GOLGA6L6A8MZA4 724 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 NRP1O14786 923 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 FKBP9O95302 570 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 PFKMP08237 780 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 ADCYAP1R1P41586 468 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 RABGGTBP53611 331 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 IL2P60568 153 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 TERF2Q15554 542 aa5.97□□□□□ -1.45
VMP1-205ENST00000587470 ZBTB41Q5SVQ8 909 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms