RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 VCPKMTQ9H867 229 aa18.22■□□□□ 0.51
PRKCSH-205ENST00000587327 ALG6Q9Y672 507 aa18.22■□□□□ 0.51
PRKCSH-205ENST00000587327 SMCHD1A6NHR9 2005 aa18.22■□□□□ 0.51
PRKCSH-205ENST00000587327 LRRN2O75325 713 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 BCRP11274 1271 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 DPEP1P16444 411 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 DRG2P55039 364 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 PLCB4Q15147 1175 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 QPCTQ16769 361 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 RDH13Q8NBN7 331 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 HOOK2Q96ED9 719 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 CABS1Q96KC9 395 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 FAM170AA1A519 330 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 C5orf60A6NFR6 353 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 NUDT17P0C025 328 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 POLR2MP0CAP2 368 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 MAPK7Q13164 816 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 MYBPC2Q14324 1141 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 CEP55Q53EZ4 464 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 ARMC9Q7Z3E5 817 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 JAMLQ86YT9 394 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 WDR11Q9BZH6 1224 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 EPB41L4BQ9H329 900 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 PABPC3Q9H361 631 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 CNOT10Q9H9A5 744 aaKnown RBP18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 ARHGEF10LQ9HCE6 1279 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 TMOD4Q9NZQ9 345 aa18.21■□□□□ 0.51
PRKCSH-205ENST00000587327 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 CCDC13Q8IYE1 715 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 SYNGAP1Q96PV0 1343 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 MIF4GDA9UHW6 222 aaKnown RBP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 CAND2O75155 1236 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 FTLP02792 175 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 UBXN2AP68543 259 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 TCEAL1Q15170 157 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 C11orf63Q6NUN7 778 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 CCDC121Q6ZUS5 278 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 HOOK3Q86VS8 718 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 BANK1Q8NDB2 785 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 SEC16BQ96JE7 1060 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 ZNF577Q9BSK1 485 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 UNC45AQ9H3U1 944 aa18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-205ENST00000587327 HIP1RO75146 1068 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 KRT13P13646 458 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 MNAT1P51948 309 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 PMS2P54278 862 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 PLTPP55058 493 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 DLG4P78352 724 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 BYSLQ13895 437 aaKnown RBP18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 DAW1Q8N136 415 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 UBL4BQ8N7F7 174 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 TATDN2Q93075 761 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 LXNQ9BS40 222 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 VEZTQ9HBM0 779 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 GOPCQ9HD26 462 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 CTTNBP2NLQ9P2B4 639 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 SNX24Q9Y343 169 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 PFASO15067 1338 aa18.19■□□□□ 0.5
PRKCSH-205ENST00000587327 SHBGP04278 402 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 ARP10275 920 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 HSPA6P17066 643 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 CDR1P51861 262 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 SMTNP53814 917 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 AADACL2Q6P093 401 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 B3GNT9Q6UX72 402 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 ZDHHC24Q6UX98 284 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 FBXO25Q8TCJ0 367 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 NEK9Q8TD19 979 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 IPO4Q8TEX9 1081 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 CENPTQ96BT3 561 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 C18orf8Q96DM3 657 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 TMEM39BQ9GZU3 492 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 ARHGEF35A5YM69 484 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 PHF2O75151 1096 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 CHRNA3P32297 505 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 PTGIRP43119 386 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 GPC5P78333 572 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 CETN1Q12798 172 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 KRT35Q92764 455 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 VTI1AQ96AJ9 217 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 PGM2Q96G03 612 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 OSBPL7Q9BZF2 842 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 PCYOX1Q9UHG3 505 aa18.18■□□□□ 0.5
PRKCSH-205ENST00000587327 EMSYQ7Z589 1322 aa18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 BACH1O14867 736 aa18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 ERMARDQ5T6L9 678 aa18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 GKAP1Q5VSY0 366 aaPredicted RBP18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 DENND2CQ68D51 928 aa18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 CCDC174Q6PII3 467 aa18.17■□□□□ 0.5
PRKCSH-205ENST00000587327 CACNA2D3Q8IZS8 1091 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms