RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 FAAP100Q0VG06 881 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 ZNF410Q86VK4 478 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 NELFCDQ8IXH7 590 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 NME8Q8N427 588 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 DUSP9Q99956 384 aaKnown RBP16.39■□□□□ 0.21
NFIX-208ENST00000587260 IFT122Q9HBG6 1241 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 FANCLQ9NW38 375 aa16.39■□□□□ 0.21
NFIX-208ENST00000587260 TRIM49BA6NDI0 452 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 CKBP12277 381 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 PTENP60484 403 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 MGAT3Q09327 533 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 KCNA1Q09470 495 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 NFIL3Q16649 462 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 EDRF1Q3B7T1 1238 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 CCDC155Q8N6L0 562 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
NFIX-208ENST00000587260 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 TMEM40Q8WWA1 233 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 TOX2Q96NM4 488 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 CELF4Q9BZC1 486 aaKnown RBP16.38■□□□□ 0.21
NFIX-208ENST00000587260 INO80BQ9C086 356 aaPredicted RBP16.38■□□□□ 0.21
NFIX-208ENST00000587260 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 IKZF4Q9H2S9 585 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 TMEM206Q9H813 350 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
NFIX-208ENST00000587260 PRDM5Q9NQX1 630 aaPredicted RBP16.38■□□□□ 0.21
NFIX-208ENST00000587260 TYW1Q9NV66 732 aaKnown RBP16.38■□□□□ 0.21
NFIX-208ENST00000587260 ZMYM2Q9UBW7 1377 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 SCN5AQ14524 2016 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 CHRNA1P02708 482 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 RPLP2P05387 115 aaKnown RBP16.37■□□□□ 0.21
NFIX-208ENST00000587260 CLTBP09497 229 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 FGFR4P22455 802 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 SNRPFP62306 86 aaKnown RBP16.37■□□□□ 0.21
NFIX-208ENST00000587260 MBTD1Q05BQ5 628 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 CDKAL1Q5VV42 579 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 TAS1R3Q7RTX0 852 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 RPAINQ86UA6 219 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 ZC3H3Q8IXZ2 948 aaKnown RBP16.37■□□□□ 0.21
NFIX-208ENST00000587260 CAGE1Q8TC20 777 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 ACCSQ96QU6 501 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 TSG101Q99816 390 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 NFKBIZQ9BYH8 718 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 GCOM2Q9BZD3 368 aaPredicted RBP16.37■□□□□ 0.21
NFIX-208ENST00000587260 PPP1R12CQ9BZL4 782 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 THAP9Q9H5L6 903 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 TBX20Q9UMR3 447 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
NFIX-208ENST00000587260 TGFB1I1O43294 461 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 EDN1P05305 212 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 PRKCBP05771 671 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
NFIX-208ENST00000587260 CRYBB1P53674 252 aaPredicted RBP16.36■□□□□ 0.21
NFIX-208ENST00000587260 CDC42EP1Q00587 391 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
NFIX-208ENST00000587260 BFSP2Q13515 415 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 SARM1Q6SZW1 724 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 MAP4K3Q8IVH8 894 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 CSGALNACT2Q8N6G5 542 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 GOLGA5Q8TBA6 731 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 CCDC113Q9H0I3 377 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 HIPK3Q9H422 1215 aa16.36■□□□□ 0.21
NFIX-208ENST00000587260 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
NFIX-208ENST00000587260 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
NFIX-208ENST00000587260 K7ERI5 159 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 CAND2O75155 1236 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 IQCF3P0C7M6 154 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 GHRP10912 638 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 EFNA5P52803 228 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 STRN3Q13033 797 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 MYBPC2Q14324 1141 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 MAPK6Q16659 721 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 TPD52L1Q16890 204 aaPredicted RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 LRRC8DQ7L1W4 858 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 IFNLR1Q8IU57 520 aaPredicted RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 ZNF710Q8N1W2 664 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 BICD1Q96G01 975 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 NOC4LQ9BVI4 516 aaKnown RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 OSBPL7Q9BZF2 842 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 GBP3Q9H0R5 595 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 TMEM39AQ9NV64 488 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 TBX21Q9UL17 535 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 LRRC10BA6NIK2 292 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 B4GALT5O43286 388 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 ERLIN2O94905 339 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 SELPP16109 830 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 EIF4BP23588 611 aaKnown RBP16.35■□□□□ 0.21
NFIX-208ENST00000587260 RBL2Q08999 1139 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 TRAF7Q6Q0C0 670 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 LRRC55Q6ZSA7 311 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 HS2ST1Q7LGA3 356 aa16.35■□□□□ 0.21
NFIX-208ENST00000587260 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms