RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ABHD16BQ9H3Z7 469 aa11.14□□□□□ -0.63
APOC1-201ENST00000586638 ST6GALNAC4Q9H4F1 302 aa11.14□□□□□ -0.63
APOC1-201ENST00000586638 SMARCAD1Q9H4L7 1026 aa11.14□□□□□ -0.63
APOC1-201ENST00000586638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.635e-9■□□□□ 8.6
APOC1-201ENST00000586638 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 LRRIQ4A6NIV6 560 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 MAFO75444 373 aaPredicted RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 TPM1P09493 284 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 RPL13P26373 211 aaKnown RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 ARL2P36404 184 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 SMTNP53814 917 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 DRP2Q13474 957 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 CAPSQ13938 189 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 C9orf50Q5SZB4 431 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 FRMD5Q7Z6J6 570 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 FAM186BQ8IYM0 893 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 LRRC71Q8N4P6 559 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 ERGIC2Q96RQ1 377 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 CBWD1Q9BRT8 395 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 LSM14BQ9BX40 385 aaKnown RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 TMEM206Q9H813 350 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 ARHGAP28Q9P2N2 729 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 ARMCX3Q9UH62 379 aaPredicted RBP11.13□□□□□ -0.63
APOC1-201ENST00000586638 TBX20Q9UMR3 447 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
APOC1-201ENST00000586638 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.13□□□□□ -0.63
APOC1-201ENST00000586638 ANKRD63C9JTQ0 380 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
APOC1-201ENST00000586638 EPHB6O15197 1021 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 NRDCO43847 1150 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 HBP1O60381 514 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
APOC1-201ENST00000586638 NAMPTP43490 491 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 IGBP1P78318 339 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
APOC1-201ENST00000586638 TNFAIP2Q03169 654 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 TRIM60Q495X7 471 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 TCERG1LQ5VWI1 586 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 SLC39A4Q6P5W5 647 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 TLK2Q86UE8 772 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 CCDC112Q8NEF3 446 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 MAFAQ8NHW3 353 aaPredicted RBP11.12□□□□□ -0.63
APOC1-201ENST00000586638 DEPTORQ8TB45 409 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 GOLGA5Q8TBA6 731 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 BICD1Q96G01 975 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 TMX1Q9H3N1 280 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 DMAC2Q9NW81 257 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 HSPBP1Q9NZL4 362 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 PPME1Q9Y570 386 aa11.12□□□□□ -0.63
APOC1-201ENST00000586638 PHLPP2Q6ZVD8 1323 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 GOLGA8IPA6NC78 632 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 GOLGA8JA6NMD2 632 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 USP27XA6NNY8 438 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 EXOC3O60645 756 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 AFPP02771 609 aaKnown RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 EDN1P05305 212 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 ADRB2P07550 413 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TRIM49P0CI25 452 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TRIM49CP0CI26 452 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TRIM21P19474 475 aaKnown RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 SLC26A2P50443 739 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 CLCN3P51790 818 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 TLE2Q04725 743 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 KCNMA1Q12791 1236 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 SNX17Q15036 470 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 PPP2R5AQ15172 486 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 MYLIPQ8WY64 445 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 SAAL1Q96ER3 474 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 ZNF668Q96K58 619 aaPredicted RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 BAG1Q99933 345 aaPredicted RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 C16orf70Q9BSU1 422 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 SUGCTQ9HAC7 445 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
APOC1-201ENST00000586638 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 FAM184BQ9ULE4 1060 aa11.11□□□□□ -0.63
APOC1-201ENST00000586638 GNEQ9Y223 722 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms