RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 KCTD17Q8N5Z5 321 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 DRC1Q96MC2 740 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 LMAN2LQ9H0V9 348 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 CSRNP2Q9H175 543 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 FBXO2Q9UK22 296 aaPredicted RBP23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 PLAGL2Q9UPG8 496 aa23.95■■□□□ 1.42
R3HDM4-202ENST00000586080 PRUNE2Q8WUY3 3088 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 CCDC169A6NNP5 214 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 SLC26A4O43511 780 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 PLCG1P19174 1290 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 PBX3P40426 434 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 PEX3P56589 373 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 DMP1Q13316 513 aaPredicted RBP23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 DHX8Q14562 1220 aaKnown RBP23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 FOXD4L6Q3SYB3 417 aaPredicted RBP23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 FOXD4L3Q6VB84 417 aaPredicted RBP23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 C1orf186Q6ZWK4 172 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 SYT2Q8N9I0 419 aaPredicted RBP23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 ZNF558Q96NG5 402 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 APOL6Q9BWW8 343 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 RSAD1Q9HA92 442 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 IPPQ9Y573 584 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 TRANK1O15050 2925 aa23.94■■□□□ 1.42
R3HDM4-202ENST00000586080 NPTXRO95502 500 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 ZSCAN22P10073 491 aaPredicted RBP23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 ITGA4P13612 1032 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 RNASELQ05823 741 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 STK38Q15208 465 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 NOMO2Q5JPE7 1267 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 PPP4R3CPQ6ZMV5 832 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 AGMOQ6ZNB7 445 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 CNNM3Q8NE01 707 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 URGCPQ8TCY9 931 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 POF1BQ8WVV4 589 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 PRIMPOLQ96LW4 560 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 ZNF396Q96N95 335 aaPredicted RBP23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 CLIC6Q96NY7 704 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 HES2Q9Y543 173 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 SRPRBQ9Y5M8 271 aaKnown RBP23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 RALGAPA2Q2PPJ7 1873 aa23.93■■□□□ 1.42
R3HDM4-202ENST00000586080 NLRC5Q86WI3 1866 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 CNTNAP2Q9UHC6 1331 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 FGF18O76093 207 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 NCLP19338 710 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 GUCY2CP25092 1073 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 SLC12A3P55017 1021 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 PRPF4BQ13523 1007 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 CSPP1Q1MSJ5 1256 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 TCEAL5Q5H9L2 206 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 SLC27A1Q6PCB7 646 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 KCNT2Q6UVM3 1135 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 MRPL10Q7Z7H8 261 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 DAW1Q8N136 415 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 SMG8Q8ND04 991 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 SPPL3Q8TCT6 385 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 EPSTI1Q96J88 318 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 TIPINQ9BVW5 301 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 GBP3Q9H0R5 595 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 FZD8Q9H461 694 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 NSUN3Q9H649 340 aaKnown RBP23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 USP20Q9Y2K6 914 aa23.92■■□□□ 1.42
R3HDM4-202ENST00000586080 SFI1A8K8P3 1242 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 ZC3H11AO75152 810 aaKnown RBP eCLIP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 OFD1O75665 1012 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 PDIA4P13667 645 aaKnown RBP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 TXLNAP40222 546 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 NPTX2P47972 431 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 EFNA5P52803 228 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 CACNB1Q02641 598 aaPredicted RBP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 MAPK7Q13164 816 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 SLC39A14Q15043 492 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 FAM187BQ17R55 369 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 GPBP1Q86WP2 473 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 HACE1Q8IYU2 909 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 RSPH1Q8WYR4 309 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 SYMPKQ92797 1274 aaKnown RBP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 CCDC113Q9H0I3 377 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 NXF3Q9H4D5 531 aaKnown RBP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 KMT5AQ9NQR1 393 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 TBC1D13Q9NVG8 400 aa23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 TFIP11Q9UBB9 837 aaKnown RBP23.91■■□□□ 1.42
R3HDM4-202ENST00000586080 FNDC1Q4ZHG4 1894 aaPredicted RBP23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 NPHP3-ACAD11A0A0J9YXS1 232 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 TTLL13PA6NNM8 815 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 N4BP3O15049 544 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 F13A1P00488 732 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 DNAJB1P25685 340 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 NASPP49321 788 aaPredicted RBP23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 PKP1Q13835 747 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 MCM6Q14566 821 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 USP49Q70CQ1 688 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 KRI1Q8N9T8 703 aaKnown RBP23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 LRRC15Q8TF66 581 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 CCSER1Q9C0I3 900 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 RNF39Q9H2S5 420 aa23.9■■□□□ 1.42
R3HDM4-202ENST00000586080 A0A1B0GUA9 196 aa23.89■■□□□ 1.41
R3HDM4-202ENST00000586080 ACKR2O00590 384 aa23.89■■□□□ 1.41
R3HDM4-202ENST00000586080 KRT18P05783 430 aaKnown RBP23.89■■□□□ 1.41
R3HDM4-202ENST00000586080 PPM1AP35813 382 aa23.89■■□□□ 1.41
R3HDM4-202ENST00000586080 EP400NLQ6ZTU2 488 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms