RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 C5orf42Q9H799 3197 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 CLASP2O75122 1294 aaKnown RBP22.76■■□□□ 1.23
TOP3A-219ENST00000584887 GALTP07902 379 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 HOXB8P17481 243 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-219ENST00000584887 SLC11A1P49279 550 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 TPRNQ4KMQ1 711 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 AGMOQ6ZNB7 445 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 BCL7CQ8WUZ0 217 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-219ENST00000584887 FAM193BQ96PV7 902 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-219ENST00000584887 ZBP1Q9H171 429 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 XPNPEP1Q9NQW7 623 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 CDH22Q9UJ99 828 aa22.76■■□□□ 1.23
TOP3A-219ENST00000584887 CARNS1A5YM72 827 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 INO80B-WBP1J3KQ70 363 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 HOXA11P31270 313 aaPredicted RBP22.75■■□□□ 1.23
TOP3A-219ENST00000584887 TFDP1Q14186 410 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.23
TOP3A-219ENST00000584887 UBXN11Q5T124 520 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 DDX53Q86TM3 631 aaKnown RBP22.75■■□□□ 1.23
TOP3A-219ENST00000584887 ZNF280BQ86YH2 543 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 EDAQ92838 391 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 TSHZ2Q9NRE2 1034 aa22.75■■□□□ 1.23
TOP3A-219ENST00000584887 A0A087WWV3 80 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 B4GALT3O60512 393 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 SEC24BO95487 1268 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 MCM7P33993 719 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 ST3GAL1Q11201 340 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 MXD4Q14582 209 aaPredicted RBP22.74■■□□□ 1.23
TOP3A-219ENST00000584887 CES5AQ6NT32 575 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 MRPL10Q7Z7H8 261 aaKnown RBP22.74■■□□□ 1.23
TOP3A-219ENST00000584887 CCDC83Q8IWF9 413 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 ASAP3Q8TDY4 903 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 CPB2Q96IY4 423 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 HSD17B14Q9BPX1 270 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 ANKEF1Q9NU02 776 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 CNTNAP2Q9UHC6 1331 aa22.74■■□□□ 1.23
TOP3A-219ENST00000584887 POTEMA6NI47 508 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 TSPAN1O60635 241 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 USO1O60763 962 aaKnown RBP22.73■■□□□ 1.23
TOP3A-219ENST00000584887 LYPLA2O95372 231 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 POMCP01189 267 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 SSBP05455 408 aaKnown RBP eCLIP22.73■■□□□ 1.23
TOP3A-219ENST00000584887 CTSAP10619 480 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 ITGA4P13612 1032 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 AFF1P51825 1210 aaKnown RBP22.73■■□□□ 1.23
TOP3A-219ENST00000584887 PTENP60484 403 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 RARS2Q5T160 578 aaKnown RBP22.73■■□□□ 1.23
TOP3A-219ENST00000584887 ZBTB33Q86T24 672 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 PIGOQ8TEQ8 1089 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 APOL6Q9BWW8 343 aa22.73■■□□□ 1.23
TOP3A-219ENST00000584887 EIF2AQ9BY44 585 aaKnown RBP22.73■■□□□ 1.23
TOP3A-219ENST00000584887 TMEM221A6NGB7 291 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 M0R296 226 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 DGAT1O75907 488 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 DDHD2O94830 711 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 WEE2P0C1S8 567 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 ZXDAP98168 799 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 NCBP1Q09161 790 aaKnown RBP22.72■■□□□ 1.23
TOP3A-219ENST00000584887 CAPSQ13938 189 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 NOTUMQ6P988 496 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 TRIM67Q6ZTA4 783 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 C12orf76Q8N812 135 aaPredicted RBP22.72■■□□□ 1.23
TOP3A-219ENST00000584887 C8orf76Q96K31 380 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 MFSD14AQ96MC6 490 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 MTMR9Q96QG7 549 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 POLR3FQ9H1D9 316 aaPredicted RBP22.72■■□□□ 1.23
TOP3A-219ENST00000584887 TMEM60Q9H2L4 133 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 KANSL3Q9P2N6 904 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 LIMCH1Q9UPQ0 1083 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 IPPQ9Y573 584 aa22.72■■□□□ 1.23
TOP3A-219ENST00000584887 SPDYE4A6NLX3 237 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 EPCAMP16422 314 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 NCLP19338 710 aaKnown RBP22.71■■□□□ 1.23
TOP3A-219ENST00000584887 RARRES1P49788 294 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 MAEAQ7L5Y9 396 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 SMG8Q8ND04 991 aaKnown RBP22.71■■□□□ 1.23
TOP3A-219ENST00000584887 CNNM3Q8NE01 707 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 VN1R3Q9BXE9 311 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 TRIM6Q9C030 488 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-219ENST00000584887 FAN1Q9Y2M0 1017 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 PRG3Q9Y2Y8 225 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-219ENST00000584887 HES2Q9Y543 173 aa22.71■■□□□ 1.23
TOP3A-219ENST00000584887 AXLP30530 894 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 MBTD1Q05BQ5 628 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 ITIH3Q06033 890 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 GIT2Q14161 759 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 PBXIP1Q96AQ6 731 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 CCDC51Q96ER9 411 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 GAD1Q99259 594 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 ADAM7Q9H2U9 754 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 POMKQ9H5K3 350 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 DZANK1Q9NVP4 752 aa22.7■■□□□ 1.22
TOP3A-219ENST00000584887 LRRIQ4A6NIV6 560 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 ALDH2P05091 517 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 GLRA2P23416 452 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 ARL2P36404 184 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 MLH1P40692 756 aa22.69■■□□□ 1.22
TOP3A-219ENST00000584887 GNL2Q13823 731 aaKnown RBP22.69■■□□□ 1.22
TOP3A-219ENST00000584887 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
TOP3A-219ENST00000584887 PTPN14Q15678 1187 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms