RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 COL4A3BPQ9Y5P4 624 aa15.09■□□□□ 0.01
CCDC57-218ENST00000583593 ARID2Q68CP9 1835 aa15.08■□□□□ 0.01
CCDC57-218ENST00000583593 NONOQ15233 471 aaKnown RBP eCLIP15.08■□□□□ 06e-7■■■□□ 15.6
CCDC57-218ENST00000583593 ASTLQ6HA08 431 aaPredicted RBP15.08■□□□□ 0
CCDC57-218ENST00000583593 ASCL5Q7RTU5 278 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 PPFIBP1Q86W92 1011 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 TMEM143Q96AN5 459 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 ZNF274Q96GC6 653 aaPredicted RBP15.08■□□□□ 0
CCDC57-218ENST00000583593 JPH2Q9BR39 696 aaPredicted RBP15.08■□□□□ 0
CCDC57-218ENST00000583593 RSAD1Q9HA92 442 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 MARCH5Q9NX47 278 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 KCNJ14Q9UNX9 436 aa15.08■□□□□ 0
CCDC57-218ENST00000583593 DCHS1Q96JQ0 3298 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 NRP1O14786 923 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 EFEMP2O95967 443 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 ALDH2P05091 517 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
CCDC57-218ENST00000583593 P4HBP07237 508 aaKnown RBP15.07■□□□□ 0
CCDC57-218ENST00000583593 SRGAP2CP0DJJ0 459 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 NBL1P41271 181 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 LETM2Q2VYF4 491 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 CWF19L1Q69YN2 538 aaKnown RBP15.07■□□□□ 0
CCDC57-218ENST00000583593 GALNT17Q6IS24 598 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 TAS1R1Q7RTX1 841 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 KRT25Q7Z3Z0 450 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
CCDC57-218ENST00000583593 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
CCDC57-218ENST00000583593 HAS1Q92839 578 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 CEP170P1Q96L14 293 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 SNX27Q96L92 541 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 FAM20AQ96MK3 541 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 TMEM175Q9BSA9 504 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 PHF20Q9BVI0 1012 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 SFXN1Q9H9B4 322 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
CCDC57-218ENST00000583593 FAN1Q9Y2M0 1017 aa15.07■□□□□ 0
CCDC57-218ENST00000583593 ZBTB39O15060 712 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 PI15O43692 258 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 POMCP01189 267 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 NPR3P17342 541 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
CCDC57-218ENST00000583593 KLRC2P26717 231 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 CLCN5P51795 746 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 LAMTOR4Q0VGL1 99 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 STK3Q13188 491 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 PPP4R3AQ6IN85 833 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 CCDC149Q6ZUS6 474 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 C4orf19Q8IY42 314 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
CCDC57-218ENST00000583593 URGCPQ8TCY9 931 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 PSPC1Q8WXF1 523 aaKnown RBP15.06■□□□□ 0
CCDC57-218ENST00000583593 SLC7A3Q8WY07 619 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 EMILIN2Q9BXX0 1053 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 RNF39Q9H2S5 420 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 GJB4Q9NTQ9 266 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 KANSL3Q9P2N6 904 aa15.06■□□□□ 0
CCDC57-218ENST00000583593 PRR23AA6NEV1 266 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 CPLX1O14810 134 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 DTNBO60941 627 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 N4BP1O75113 896 aaKnown RBP15.05■□□□□ -0
CCDC57-218ENST00000583593 REC8O95072 547 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 SOD2P04179 222 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 RFC5P40937 340 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 SPIRE1Q08AE8 756 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 TDGQ13569 410 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 EARS2Q5JPH6 523 aaKnown RBP15.05■□□□□ -0
CCDC57-218ENST00000583593 C15orf39Q6ZRI6 1047 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 OTOP3Q7RTS5 596 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 NEK8Q86SG6 692 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 FERMT3Q86UX7 667 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 COLGALT2Q8IYK4 626 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 RNF149Q8NC42 400 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 ACSF2Q96CM8 615 aaPredicted RBP15.05■□□□□ -0
CCDC57-218ENST00000583593 KCNK12Q9HB15 430 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 MRPL17Q9NRX2 175 aaKnown RBP15.05■□□□□ -0
CCDC57-218ENST00000583593 MIOSQ9NXC5 875 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 RGL1Q9NZL6 768 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 STK39Q9UEW8 545 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 PPME1Q9Y570 386 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 CYP46A1Q9Y6A2 500 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 CNTNAP2Q9UHC6 1331 aa15.05■□□□□ -0
CCDC57-218ENST00000583593 TDRD15B5MCY1 1934 aaKnown RBP15.04■□□□□ -0
CCDC57-218ENST00000583593 F8W810 466 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 INPPL1O15357 1258 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 DKC1O60832 514 aaKnown RBP eCLIP15.04■□□□□ -0
CCDC57-218ENST00000583593 YWHABP31946 246 aaKnown RBP15.04■□□□□ -0
CCDC57-218ENST00000583593 EMC2Q15006 297 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 EPHA7Q15375 998 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 KIAA0319Q5VV43 1072 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 EXOC8Q8IYI6 725 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
CCDC57-218ENST00000583593 OXER1Q8TDS5 423 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 DYDC2Q96IM9 177 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 FAM193BQ96PV7 902 aaPredicted RBP15.04■□□□□ -0
CCDC57-218ENST00000583593 RPS6KC1Q96S38 1066 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 LXNQ9BS40 222 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 HERC2P3Q9BVR0 1158 aa15.04■□□□□ -0
CCDC57-218ENST00000583593 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
CCDC57-218ENST00000583593 TM6SF1Q9BZW5 370 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms