RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	RBM12	Q9NTZ6	932 aa	Known RBP	5.93	□□□□□ -1.46
MSI2-216	ENST00000582772	TMEM161A	Q9NX61	479 aa		5.93	□□□□□ -1.46
MSI2-216	ENST00000582772	PADI3	Q9ULW8	664 aa		5.93	□□□□□ -1.46
MSI2-216	ENST00000582772	IGSF9B	Q9UPX0	1349 aa		5.93	□□□□□ -1.46
MSI2-216	ENST00000582772	ANK2	Q01484	3957 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	VPS37C	A5D8V6	355 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	FAM149A	A5PLN7	773 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	ZNF316	A6NFI3	1004 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772		H3BRB1	525 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	ELL2	O00472	640 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	DCLK1	O15075	740 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	HOXA2	O43364	376 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	CIAO1	O76071	339 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	NDUFB10	O96000	172 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	POLR3D	P05423	398 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	SFTPC	P11686	197 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	ACTN2	P35609	894 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	RFX5	P48382	616 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	ATXN3	P54252	364 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	FAM189B	P81408	668 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	CCDC173	Q0VFZ6	552 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	TBC1D25	Q3MII6	688 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	DIEXF	Q68CQ4	756 aa	Known RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	TBC1D9	Q6ZT07	1266 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	SLC24A5	Q71RS6	500 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	MDFI	Q99750	246 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	EPN3	Q9H201	632 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	TUT1	Q9H6E5	874 aa	Known RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	ZNF334	Q9HCZ1	680 aa	Predicted RBP	5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	RGS18	Q9NS28	235 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	SYNPO2	Q9UMS6	1093 aa		5.92	□□□□□ -1.46
MSI2-216	ENST00000582772	VPS13C	Q709C8	3753 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772		B4DLN1	442 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772		K7ENP7	123 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	ARNTL	O00327	626 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	GLUD1	P00367	558 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	ALAS1	P13196	640 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	CCNE1	P24864	410 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	ARID4A	P29374	1257 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	MRPL12	P52815	198 aa	Known RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	PAK2	Q13177	524 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	FKBP5	Q13451	457 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	BAAT	Q14032	418 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	SPDYC	Q5MJ68	293 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	INO80C	Q6PI98	192 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	NSMF	Q6X4W1	530 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	RSPH3	Q86UC2	560 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	NPAS3	Q8IXF0	933 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	LINC01465	Q8N7H1	131 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	CEP76	Q8TAP6	659 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	SSC4D	Q8WTU2	575 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	LMBR1	Q8WVP7	490 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	PIGK	Q92643	395 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	LGMN	Q99538	433 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	PLA2G2F	Q9BZM2	168 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	PIDD1	Q9HB75	910 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	RNF19A	Q9NV58	838 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	LRP2BP	Q9P2M1	347 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	SLC6A14	Q9UN76	642 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	CDY2A	Q9Y6F7	541 aa		5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	FLNA	P21333	2647 aa	Known RBP	5.91	□□□□□ -1.46
MSI2-216	ENST00000582772	ALDH1L1	O75891	902 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	SIX3	O95343	332 aa	Predicted RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	ADH1A	P07327	375 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	SERPINF2	P08697	491 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	POU2F2	P09086	479 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	FGFR1	P11362	822 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	GBP1	P32455	592 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	CD97	P48960	835 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	GFPT1	Q06210	699 aa	Predicted RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	MVP	Q14764	893 aa	Known RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	CCDC27	Q2M243	656 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	C2orf27A	Q580R0	203 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	PI16	Q6UXB8	463 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	CHST3	Q7LGC8	479 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	RABEPK	Q7Z6M1	372 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	TMEM173	Q86WV6	379 aa	Predicted RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	ARID3B	Q8IVW6	561 aa	Predicted RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	PLEKHM2	Q8IWE5	1019 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	PIP4P2	Q8N4L2	257 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	RSPH1	Q8WYR4	309 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	IGSF21	Q96ID5	467 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	LPIN3	Q9BQK8	851 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	VN1R3	Q9BXE9	311 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	BRD9	Q9H8M2	597 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	ATP6V0A4	Q9HBG4	840 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	TMEM74B	Q9NUR3	256 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	SETD4	Q9NVD3	440 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	IFT57	Q9NWB7	429 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	GDE1	Q9NZC3	331 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	CEP126	Q9P2H0	1117 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	PILRB	Q9UKJ0	227 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	KCNH3	Q9ULD8	1083 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	SLC8A2	Q9UPR5	921 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	WNT6	Q9Y6F9	365 aa		5.9	□□□□□ -1.46
MSI2-216	ENST00000582772	KDM3A	Q9Y4C1	1321 aa		5.9	□□□□□ -1.47
MSI2-216	ENST00000582772	ACAN	P16112	2415 aa		5.89	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms