RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ZNF507Q8TCN5 953 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PCYT2Q99447 389 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 KCTD10Q9H3F6 313 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 NRBP2Q9NSY0 501 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PCDHA11Q9Y5I1 949 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 UBE4BO95155 1302 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 CHD7Q9P2D1 2997 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 ZBBXA8MT70 800 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 K7ENM7 598 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 CALUO43852 315 aaPredicted RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 TPM2P07951 284 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 CKBP12277 381 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PLS3P13797 630 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 SELPP16109 830 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 HOXC8P31273 242 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 MTIF2P46199 727 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 NR1I3Q14994 352 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 BMT2Q1RMZ1 405 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 ZCWPW2Q504Y3 356 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 LRRC8DQ7L1W4 858 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 APTXQ7Z2E3 356 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 PHOSPHO2Q8TCD6 241 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 GLG1Q92896 1179 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 EEF2KMTQ96G04 330 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
SRSF1-204ENST00000581979 VPS16Q9H269 839 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
SRSF1-204ENST00000581979 MYO9BQ13459 2157 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 H3BRB1 525 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 DLL1O00548 723 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 N4BP3O15049 544 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 BAIAP3O94812 1187 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 MAPTP10636 758 aaKnown RBP13.8□□□□□ -0.2
SRSF1-204ENST00000581979 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
SRSF1-204ENST00000581979 HIC1Q14526 733 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
SRSF1-204ENST00000581979 ZC2HC1CQ53FD0 456 aaPredicted RBP13.8□□□□□ -0.2
SRSF1-204ENST00000581979 ZNF720Q7Z2F6 126 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 VSTM4Q8IW00 320 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 SLC9A7Q96T83 725 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 NKX2-4Q9H2Z4 354 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
SRSF1-204ENST00000581979 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
SRSF1-204ENST00000581979 LRRC10BA6NIK2 292 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 LGR5O75473 907 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 CXCL10P02778 98 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 LGALS2P05162 132 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 RABGGTBP53611 331 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 EDRF1Q3B7T1 1238 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 CEP63Q96MT8 703 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 ZNF830Q96NB3 372 aaPredicted RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 FIZ1Q96SL8 496 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 NIFKQ9BYG3 293 aaKnown RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
SRSF1-204ENST00000581979 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 EMSYQ7Z589 1322 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 CUL9Q8IWT3 2517 aa13.79□□□□□ -0.2
SRSF1-204ENST00000581979 PES1O00541 588 aaKnown RBP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 PDXKO00764 312 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 TEX33O43247 280 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 MARK3P27448 753 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 PEX3P56589 373 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 GSDMDP57764 484 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 ZNF200P98182 395 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 ALCAMQ13740 583 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 EMC2Q15006 297 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 LRRC55Q6ZSA7 311 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 PLPPR4Q7Z2D5 763 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 SERINC5Q86VE9 423 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 WNT8BQ93098 351 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 TUBGCP2Q9BSJ2 902 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 SMARCAD1Q9H4L7 1026 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 PRDM12Q9H4Q4 367 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 CETN3O15182 167 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 NBNO60934 754 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 MYOGP15173 224 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 HOXD13P35453 343 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 SMTNP53814 917 aa13.78□□□□□ -0.2
SRSF1-204ENST00000581979 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
SRSF1-204ENST00000581979 ADAM9Q13443 819 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms