RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PER2O15055 1255 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 ASAP2O43150 1006 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 HOXA2O43364 376 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 ZC3H11AO75152 810 aaKnown RBP eCLIP13.94□□□□□ -0.18
CBX1-206ENST00000581003 DDHD2O94830 711 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 GLP2RO95838 553 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 EOMESO95936 686 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 IL9P15248 144 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 LAG3P18627 525 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 SYT1P21579 422 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 NRIP1P48552 1158 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 BCAR1P56945 870 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 TFDP1Q14186 410 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 PDIA5Q14554 519 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 COL19A1Q14993 1142 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 PLPP4Q5VZY2 271 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 CDCA2Q69YH5 1023 aaPredicted RBP13.94□□□□□ -0.18
CBX1-206ENST00000581003 SLC39A11Q8N1S5 342 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 MCPH1Q8NEM0 835 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 VN1R2Q8NFZ6 395 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 ZFP42Q96MM3 310 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 UHRF1Q96T88 793 aaPredicted RBP13.94□□□□□ -0.18
CBX1-206ENST00000581003 NRDE2Q9H7Z3 1164 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 PCDHB12Q9Y5F1 795 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 CLIC4Q9Y696 253 aa13.94□□□□□ -0.18
CBX1-206ENST00000581003 TCF20Q9UGU0 1960 aaKnown RBP13.94□□□□□ -0.18
CBX1-206ENST00000581003 NPHP3-ACAD11A0A0J9YXS1 232 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 LAD1O00515 517 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 ZNF623O75123 536 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 NPTXRO95502 500 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 POMCP01189 267 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 AKAP5P24588 427 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 MLH1P40692 756 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 SLC11A1P49279 550 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
CBX1-206ENST00000581003 MAPK7Q13164 816 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
CBX1-206ENST00000581003 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 GLB1LQ6UWU2 654 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 MRPL10Q7Z7H8 261 aaKnown RBP13.93□□□□□ -0.18
CBX1-206ENST00000581003 AUTS2Q8WXX7 1259 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 PABPC5Q96DU9 382 aaKnown RBP13.93□□□□□ -0.18
CBX1-206ENST00000581003 VN1R3Q9BXE9 311 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 CCDC113Q9H0I3 377 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 CD320Q9NPF0 282 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 TLR9Q9NR96 1032 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 CACNG4Q9UBN1 327 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
CBX1-206ENST00000581003 FSCN2O14926 492 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 HIP1RO75146 1068 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 EYA4O95677 639 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 SSBP05455 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBX1-206ENST00000581003 NCLP19338 710 aaKnown RBP13.92□□□□□ -0.18
CBX1-206ENST00000581003 RAB27AP51159 221 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 CEBPZQ03701 1054 aaKnown RBP13.92□□□□□ -0.18
CBX1-206ENST00000581003 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 NAALADL2Q58DX5 795 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 EEF1DP3Q658K8 133 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 NOTUMQ6P988 496 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 USP49Q70CQ1 688 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 MICAL1Q8TDZ2 1067 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 MRPS27Q92552 414 aaKnown RBP13.92□□□□□ -0.18
CBX1-206ENST00000581003 RABGGTAQ92696 567 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 KHSRPQ92945 711 aaKnown RBP eCLIP13.92□□□□□ -0.18
CBX1-206ENST00000581003 GAD1Q99259 594 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 TCF25Q9BQ70 676 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 NFKBIZQ9BYH8 718 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 CSRNP2Q9H175 543 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 PDZD7Q9H5P4 517 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 AAASQ9NRG9 546 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
CBX1-206ENST00000581003 MIOSQ9NXC5 875 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 KLK14Q9P0G3 267 aa13.92□□□□□ -0.18
CBX1-206ENST00000581003 BARX2Q9UMQ3 279 aaPredicted RBP13.92□□□□□ -0.18
CBX1-206ENST00000581003 CNTNAP2Q9UHC6 1331 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 ITGA4P13612 1032 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 NAMPTP43490 491 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 SCNN1GP51170 649 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 PTPAQ15257 358 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 LEXMQ3ZCV2 418 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 TMEM119Q4V9L6 283 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 SPECC1Q5M775 1068 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
CBX1-206ENST00000581003 PTCRAQ6ISU1 281 aaPredicted RBP13.91□□□□□ -0.18
CBX1-206ENST00000581003 RINT1Q6NUQ1 792 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 FAM43BQ6ZT52 329 aaPredicted RBP13.91□□□□□ -0.18
CBX1-206ENST00000581003 BRAPQ7Z569 592 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
CBX1-206ENST00000581003 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
CBX1-206ENST00000581003 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
CBX1-206ENST00000581003 RAB34Q9BZG1 259 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms