RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 ST13P5Q8NFI4 369 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-210ENST00000580713 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-210ENST00000580713 RSPH1Q8WYR4 309 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 RTKNQ9BST9 563 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 VN1R3Q9BXE9 311 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 ANO3Q9BYT9 981 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 BCO2Q9BYV7 579 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 LY9Q9HBG7 655 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 STK39Q9UEW8 545 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 DPP7Q9UHL4 492 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 URODP06132 367 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 PSAPP07602 524 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 ADRB1P08588 477 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 SKIP12755 728 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 PHKA2P46019 1235 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 GPC3P51654 580 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 NAPAP54920 295 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 KRT32Q14532 448 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 ZNF528Q3MIS6 628 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 GET4Q7L5D6 327 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 RAB11FIP4Q86YS3 637 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 MAML2Q8IZL2 1156 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 BORCS6Q96GS4 357 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 GCOM2Q9BZD3 368 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 GABBR1Q9UBS5 961 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 FBXO4Q9UKT5 387 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 SMG5Q9UPR3 1016 aaKnown RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 PCDHGA2Q9Y5H1 932 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 MAFBQ9Y5Q3 323 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-210ENST00000580713 TAF6LQ9Y6J9 622 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
TOP3A-210ENST00000580713 FANCMQ8IYD8 2048 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 IPO5O00410 1097 aaKnown RBP12.08□□□□□ -0.48
TOP3A-210ENST00000580713 RFPL2O75678 378 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 GLUD1P00367 558 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 ALDH2P05091 517 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 ADH1AP07327 375 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 LAMP2P13473 410 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 PSMA5P28066 241 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 ADCY7P51828 1080 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 SNW1Q13573 536 aaKnown RBP12.08□□□□□ -0.48
TOP3A-210ENST00000580713 UBXN2BQ14CS0 331 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF280BQ86YH2 543 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
TOP3A-210ENST00000580713 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 JAKMIP1Q96N16 626 aaKnown RBP12.08□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 SLC2A4RGQ9NR83 387 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 CHST12Q9NRB3 414 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 NRBP2Q9NSY0 501 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.08□□□□□ -0.48
TOP3A-210ENST00000580713 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 NUMBLQ9Y6R0 609 aa12.08□□□□□ -0.48
TOP3A-210ENST00000580713 CHD8Q9HCK8 2581 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 KANSL1LA0AUZ9 987 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 MEIS3P2A8K0S8 358 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
TOP3A-210ENST00000580713 LILRB3O75022 631 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 OFD1O75665 1012 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 SPATA31D3P0C874 917 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 CALM1P0DP23 149 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 CALM2P0DP24 149 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 CALM3P0DP25 149 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 SREBF1P36956 1147 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 STARD6P59095 220 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 E2F4Q16254 413 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 PPM1JQ5JR12 505 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-210ENST00000580713 SPATA31D4Q6ZUB0 917 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 NIPA1Q7RTP0 329 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 MB21D2Q8IYB1 491 aaPredicted RBP12.07□□□□□ -0.48
TOP3A-210ENST00000580713 TMTC2Q8N394 836 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 LINC01465Q8N7H1 131 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 PHKBQ93100 1093 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 PGBD4Q96DM1 585 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 RIC8AQ9NPQ8 531 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 ZSCAN32Q9NX65 697 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 GMEB2Q9UKD1 530 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
TOP3A-210ENST00000580713 PIN4Q9Y237 131 aaKnown RBP12.07□□□□□ -0.48
TOP3A-210ENST00000580713 SSX2IPQ9Y2D8 614 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 PCDHA10Q9Y5I2 948 aa12.07□□□□□ -0.48
TOP3A-210ENST00000580713 FAM170BA6NMN3 283 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 FAM86B1E9PN63 330 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 TEX28O15482 410 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 PRC1O43663 620 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 DDHD2O94830 711 aa12.06□□□□□ -0.48
TOP3A-210ENST00000580713 FAM86B2P0C5J1 330 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms