RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TRAF1Q13077 416 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 GRM4Q14833 912 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 CSRP2Q16527 193 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 LAIR1Q6GTX8 287 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 PARM1Q6UWI2 310 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 CYP26C1Q6V0L0 522 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 GET4Q7L5D6 327 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 SMG7Q92540 1137 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 TNPO1Q92973 898 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 EVI5LQ96CN4 794 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 SHDQ96IW2 340 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 MRPL9Q9BYD2 267 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 JADE2Q9NQC1 790 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
SMARCE1-217ENST00000580654 LOC400499M0QZD8 3231 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 COL1A2P08123 1366 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 HBP1O60381 514 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 RETP07949 1114 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 ZSCAN20P17040 1043 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 FGFR4P22455 802 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 TARSP26639 723 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 MAGEA9P43362 315 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 NT5C2P49902 561 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 PRKCQQ04759 706 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 ITGB3BPQ13352 177 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 SLC44A4Q53GD3 710 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 IFIT1BQ5T764 474 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 LRSAM1Q6UWE0 723 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 UNQ6494/PRO21346Q6UXR6 183 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 PIBF1Q8WXW3 757 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 DDX1Q92499 740 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 LPPQ93052 612 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 EMILIN2Q9BXX0 1053 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 ADAMTS10Q9H324 1103 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 SENP2Q9HC62 589 aa8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 SEPT9Q9UHD8 586 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-217ENST00000580654 MYH9P35579 1960 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 NOTCH4Q99466 2003 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 COL4A2P08572 1712 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 TEX28O15482 410 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 MAFGO15525 162 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 ZIC2O95409 532 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 CCNE2O96020 404 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 NCLP19338 710 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 EIF4BP23588 611 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 RPS9P46781 194 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 CLCN3P51790 818 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 NLRP11P59045 1033 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 MTAPQ13126 283 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 ZNF484Q5JVG2 852 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 ZBTB41Q5SVQ8 909 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 C20orf194Q5TEA3 1177 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 RSPO2Q6UXX9 243 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 CYB5R4Q7L1T6 521 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 TAS1R1Q7RTX1 841 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 ZNF280BQ86YH2 543 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 CCDC60Q8IWA6 550 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 LINC01465Q8N7H1 131 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 ZNF668Q96K58 619 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 MYL10Q9BUA6 226 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 FAM126AQ9BYI3 521 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 NT5C3AQ9H0P0 336 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 KCNH7Q9NS40 1196 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 RXFP3Q9NSD7 469 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 IGSF5Q9NSI5 407 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 NFASCO94856 1347 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 DMXL2Q8TDJ6 3036 aa8.75□□□□□ -1.01
SMARCE1-217ENST00000580654 SMG1Q96Q15 3661 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 SRRM3A6NNA2 597 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 C2CD2LO14523 706 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 OFD1O75665 1012 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 DDHD2O94830 711 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 EFEMP2O95967 443 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 SPATA31D3P0C874 917 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 SLC26A2P50443 739 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 LIMK1P53667 647 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 RING1Q06587 406 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 TROAPQ12815 778 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 UBE2SQ16763 222 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 LONRF3Q496Y0 759 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 ABHD15Q6UXT9 468 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 SPATA31D4Q6ZUB0 917 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 CELF5Q8N6W0 485 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 CUL5Q93034 780 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 RPS6KC1Q96S38 1066 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 UBAC1Q9BSL1 405 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 CHMP4BQ9H444 224 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 MRPL17Q9NRX2 175 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 FAM217BQ9NTX9 383 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 WASF3Q9UPY6 502 aa8.74□□□□□ -1.01
SMARCE1-217ENST00000580654 TAF4O00268 1085 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 CSDE1O75534 798 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 GLUD1P00367 558 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 PHKA2P46019 1235 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 NTHL1P78549 312 aa8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 SRSF5Q13243 272 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-217ENST00000580654 NOMO2Q5JPE7 1267 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms