RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 BICD1Q96G01 975 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 LBHD1Q9BQE6 289 aaPredicted RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 FTHL17Q9BXU8 183 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
SKA2-205ENST00000580541 NAT10Q9H0A0 1025 aaKnown RBP15.69■□□□□ 0.1
SKA2-205ENST00000580541 CYP2C18P33260 490 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 MBTD1Q05BQ5 628 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 NFX1Q12986 1120 aaKnown RBP15.68■□□□□ 0.1
SKA2-205ENST00000580541 KNOP1Q1ED39 458 aaKnown RBP15.68■□□□□ 0.1
SKA2-205ENST00000580541 ZPBP2Q6X784 338 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 EPM2AIP1Q7L775 607 aaPredicted RBP15.68■□□□□ 0.1
SKA2-205ENST00000580541 C7orf61Q8IZ16 206 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 SEPT8Q92599 483 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 DHTKD1Q96HY7 919 aaPredicted RBP15.68■□□□□ 0.1
SKA2-205ENST00000580541 FIZ1Q96SL8 496 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 KIFC3Q9BVG8 833 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 STRA6Q9BX79 667 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 CDHR5Q9HBB8 845 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 ST3GAL5Q9UNP4 418 aa15.68■□□□□ 0.1
SKA2-205ENST00000580541 DNAH12Q6ZR08 3092 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 BICDL2A1A5D9 508 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 TRIM43BA6NCK2 446 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 PPP1R37O75864 691 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 PRPF6O94906 941 aaKnown RBP15.67■□□□□ 0.1
SKA2-205ENST00000580541 CAVIN2O95810 425 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 MYBP10242 640 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 GHRP10912 638 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 LIG4P49917 911 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 CCL23P55773 120 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 LPIN1Q14693 890 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 STX1AQ16623 288 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 ZC2HC1CQ53FD0 456 aaPredicted RBP15.67■□□□□ 0.1
SKA2-205ENST00000580541 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 NOTUMQ6P988 496 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 MAP4K3Q8IVH8 894 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 HPS3Q969F9 1004 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 TRIM43Q96BQ3 446 aaPredicted RBP15.67■□□□□ 0.1
SKA2-205ENST00000580541 TSG101Q99816 390 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 TCHPQ9BT92 498 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 IFIH1Q9BYX4 1025 aaKnown RBP15.67■□□□□ 0.1
SKA2-205ENST00000580541 CCDC113Q9H0I3 377 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 GBP3Q9H0R5 595 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
SKA2-205ENST00000580541 NOC2LQ9Y3T9 749 aaKnown RBP15.67■□□□□ 0.1
SKA2-205ENST00000580541 HNRNPDLO14979 420 aaKnown RBP15.66■□□□□ 0.1
SKA2-205ENST00000580541 N4BP3O15049 544 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 KIAA0391O15091 583 aaKnown RBP15.66■□□□□ 0.1
SKA2-205ENST00000580541 CALUO43852 315 aaPredicted RBP15.66■□□□□ 0.1
SKA2-205ENST00000580541 EFCAB14O75071 495 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 SKIP12755 728 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 ACTN1P12814 892 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 PRCPP42785 496 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 PPIGQ13427 754 aaKnown RBP eCLIP15.66■□□□□ 0.1
SKA2-205ENST00000580541 KYAT1Q16773 422 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 ZSCAN23Q3MJ62 389 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 KIAA0895Q8NCT3 520 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 SCFD1Q8WVM8 642 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 MINDY3Q9H8M7 445 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 GDAQ9Y2T3 454 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 ADGRA3Q8IWK6 1321 aa15.66■□□□□ 0.1
SKA2-205ENST00000580541 A0A1B0GUA9 196 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 PDXKO00764 312 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 CLDN3O15551 220 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 TOM1L1O75674 476 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 FGFR1OPO95684 399 aaKnown RBP15.65■□□□□ 0.1
SKA2-205ENST00000580541 PIGRP01833 764 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 CXCL10P02778 98 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 RPL13P26373 211 aaKnown RBP15.65■□□□□ 0.1
SKA2-205ENST00000580541 CD52P31358 61 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 MATR3P43243 847 aaKnown RBP eCLIP15.65■□□□□ 0.1
SKA2-205ENST00000580541 IKBKEQ14164 716 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 PLEKHG4Q58EX7 1191 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 ATF7IP2Q5U623 682 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 FAM228AQ86W67 206 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 HACE1Q8IYU2 909 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 TMEM40Q8WWA1 233 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 ACO2Q99798 780 aaKnown RBP15.65■□□□□ 0.1
SKA2-205ENST00000580541 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 ERVK-5Q9HDB9 667 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 TYW1Q9NV66 732 aaKnown RBP15.65■□□□□ 0.1
SKA2-205ENST00000580541 PIN4Q9Y237 131 aaKnown RBP15.65■□□□□ 0.1
SKA2-205ENST00000580541 TNFSF13BQ9Y275 285 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 CNTNAP2Q9UHC6 1331 aa15.65■□□□□ 0.1
SKA2-205ENST00000580541 SYCE3A1L190 88 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 TSPAN1O60635 241 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 LDHAP00338 332 aaKnown RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 ERCC5P28715 1186 aaPredicted RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 RGS19P49795 217 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 CASP5P51878 434 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 FPGSQ05932 587 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 LRRC63Q05C16 580 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 TYRO3Q06418 890 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms