RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SELENOOQ9BVL4 669 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 SLC13A1Q9BZW2 595 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 MTFR1LQ9H019 292 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 SYNPO2LQ9H987 977 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.82□□□□□ -1.8
KPNB1-208ENST00000580019 AS3MTQ9HBK9 375 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 PLCB1Q9NQ66 1216 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 FAM86C1Q9NVL1 165 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 CLEC1BQ9P126 229 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 LUZP4Q9P127 313 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 WHRNQ9P202 907 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 RBPJLQ9UBG7 517 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ASH2LQ9UBL3 628 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF214Q9UL59 606 aaPredicted RBP3.82□□□□□ -1.8
KPNB1-208ENST00000580019 APOBEC2Q9Y235 224 aaKnown RBP3.82□□□□□ -1.8
KPNB1-208ENST00000580019 X6R8D5 127 aa3.82□□□□□ -1.8
KPNB1-208ENST00000580019 FRMPD2Q68DX3 1309 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 FAM83GA6ND36 823 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TCERG1O14776 1098 aaKnown RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 KIAA0355O15063 1070 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 PRODHO43272 600 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 SLC26A4O43511 780 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TIMM44O43615 452 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 KPNA6O60684 536 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 JMJD7P0C870 316 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 PABPC1P11940 636 aaKnown RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 BPIP17213 487 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 COPB2P35606 906 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 IGFALSP35858 605 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 RECQLP46063 649 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF280AP59817 542 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 CHAF1AQ13111 956 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 GRB10Q13322 594 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 KCTD2Q14681 263 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 YOD1Q5VVQ6 348 aaPredicted RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 IQSEC1Q6DN90 963 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 OLFML1Q6UWY5 402 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 PROSER1Q86XN7 944 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 KIF18BQ86Y91 864 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 D2HGDHQ8N465 521 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 ACRBPQ8NEB7 543 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 SLC7A14Q8TBB6 771 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 KLHL6Q8WZ60 621 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TIFAQ96CG3 184 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TRMT2BQ96GJ1 504 aaKnown RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 FUBP3Q96I24 572 aaKnown RBP eCLIP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 NEUROD6Q96NK8 337 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TRIM39Q9HCM9 518 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 NLRC4Q9NPP4 1024 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 NDOR1Q9UHB4 597 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 ZFP69BQ9UJL9 534 aa3.81□□□□□ -1.8
KPNB1-208ENST00000580019 TNPO3Q9Y5L0 923 aaKnown RBP3.81□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF608Q9ULD9 1512 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 KLRG2A4D1S0 409 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 PRRT4C9JH25 899 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 NEMP1O14524 444 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 MYBL2P10244 700 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 PF4V1P10720 104 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 PLS3P13797 630 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 MCCP23508 829 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 DDIT3P35638 169 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 CCT5P48643 541 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 PPP2R2AP63151 447 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 POU5F1Q01860 360 aaKnown RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 ADCY1Q08828 1119 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 BIRC3Q13489 604 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 NFYCQ13952 458 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 NOLC1Q14978 699 aaKnown RBP eCLIP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 SEPT7Q16181 437 aaKnown RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 TMEM240Q5SV17 173 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 GPR158Q5T848 1215 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 CDCA2Q69YH5 1023 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 C1orf228Q6PIY5 440 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 MMS22LQ6ZRQ5 1243 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 DRC7Q8IY82 874 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 FAM186BQ8IYM0 893 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 Q8N1Y9 231 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 CPA6Q8N4T0 437 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 CCDC89Q8N998 374 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 C1orf131Q8NDD1 294 aaKnown RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 GSTCDQ8NEC7 633 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 VPS37AQ8NEZ2 397 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 COG1Q8WTW3 980 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 WNK4Q96J92 1243 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 MAGEB10Q96LZ2 347 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 AIFM3Q96NN9 605 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 NELFAQ9H3P2 528 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 KCND1Q9NSA2 647 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 RNF7Q9UBF6 113 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 HECAQ9UBI9 543 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 FBXO2Q9UK22 296 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 COA3Q9Y2R0 106 aaPredicted RBP3.8□□□□□ -1.8
KPNB1-208ENST00000580019 SPATA31D1Q6ZQQ2 1576 aa3.8□□□□□ -1.8
KPNB1-208ENST00000580019 ZCCHC6Q5VYS8 1495 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 CHD1O14646 1710 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 K7ESF4 209 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 APAF1O14727 1248 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 CBFA2T2O43439 604 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 CUTAO60888 179 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 TADA3O75528 432 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms