RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 CARNS1A5YM72 827 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 MEIS3P2A8K0S8 358 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 ARF4P18085 180 aaPredicted RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 IRS1P35568 1242 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 NAMPTP43490 491 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 RNASELQ05823 741 aaKnown RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 CDCA2Q69YH5 1023 aaPredicted RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 PDE12Q6L8Q7 609 aaKnown RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 AGMOQ6ZNB7 445 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 DEPTORQ8TB45 409 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 MRPS27Q92552 414 aaKnown RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 CDK5RAP3Q96JB5 506 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 AK8Q96MA6 479 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 TRIM6Q9C030 488 aaPredicted RBP29■■■□□ 2.23
LIMD2-208ENST00000579814 NT5C3AQ9H0P0 336 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 RSAD1Q9HA92 442 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 TLR9Q9NR96 1032 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 FOXD4L1Q9NU39 408 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 KANSL3Q9P2N6 904 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 LZTS1Q9Y250 596 aa29■■■□□ 2.23
LIMD2-208ENST00000579814 ITGA4P13612 1032 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 HYAL1Q12794 435 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 HACE1Q8IYU2 909 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 ADAMTS19Q8TE59 1207 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 BSNDQ8WZ55 320 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 PRIMPOLQ96LW4 560 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 EIF2AQ9BY44 585 aaKnown RBP28.99■■■□□ 2.23
LIMD2-208ENST00000579814 IGFLR1Q9H665 355 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 TBC1D13Q9NVG8 400 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 CLDND1Q9NY35 253 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 IPPQ9Y573 584 aa28.99■■■□□ 2.23
LIMD2-208ENST00000579814 PBX3P40426 434 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 BCAR1P56945 870 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 COL19A1Q14993 1142 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 SF3A1Q15459 793 aaKnown RBP28.98■■■□□ 2.23
LIMD2-208ENST00000579814 MAPK6Q16659 721 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 LEXMQ3ZCV2 418 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 HYIQ5T013 277 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 PPP4R3CPQ6ZMV5 832 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 SMG8Q8ND04 991 aaKnown RBP28.98■■■□□ 2.23
LIMD2-208ENST00000579814 FZD8Q9H461 694 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 POLD4Q9HCU8 107 aa28.98■■■□□ 2.23
LIMD2-208ENST00000579814 A0A1B0GUA9 196 aa28.97■■■□□ 2.23
LIMD2-208ENST00000579814 B4GALT5O43286 388 aa28.97■■■□□ 2.23
LIMD2-208ENST00000579814 ZC3H11AO75152 810 aaKnown RBP eCLIP28.97■■■□□ 2.23
LIMD2-208ENST00000579814 FAM187BQ17R55 369 aa28.97■■■□□ 2.23
LIMD2-208ENST00000579814 SLC39A11Q8N1S5 342 aa28.97■■■□□ 2.23
LIMD2-208ENST00000579814 SLC26A4O43511 780 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 UBA7P41226 1012 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 EFNA5P52803 228 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 ERVFC1P60507 584 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 TMEM132AQ24JP5 1023 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 RINT1Q6NUQ1 792 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 SLC27A1Q6PCB7 646 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 KCNK18Q7Z418 384 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 CABP7Q86V35 215 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 UHRF1Q96T88 793 aaPredicted RBP28.96■■■□□ 2.23
LIMD2-208ENST00000579814 NRDE2Q9H7Z3 1164 aa28.96■■■□□ 2.23
LIMD2-208ENST00000579814 NLRC5Q86WI3 1866 aa28.95■■■□□ 2.23
LIMD2-208ENST00000579814 PRPF4BQ13523 1007 aaKnown RBP28.95■■■□□ 2.22
LIMD2-208ENST00000579814 CTC1Q2NKJ3 1217 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 HSCBQ8IWL3 235 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 TMEM169Q96HH4 297 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 PNMA5Q96PV4 448 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 FAM193BQ96PV7 902 aaPredicted RBP28.95■■■□□ 2.22
LIMD2-208ENST00000579814 PLIN2Q99541 437 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 GBP3Q9H0R5 595 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 TLE6Q9H808 572 aa28.95■■■□□ 2.22
LIMD2-208ENST00000579814 NGRNQ9NPE2 291 aaKnown RBP28.95■■■□□ 2.22
LIMD2-208ENST00000579814 FNDC1Q4ZHG4 1894 aaPredicted RBP28.94■■■□□ 2.22
LIMD2-208ENST00000579814 NT5C1B-RDH14C9J2C7 533 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 ACKR2O00590 384 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 SSBP05455 408 aaKnown RBP eCLIP28.94■■■□□ 2.22
LIMD2-208ENST00000579814 PRKCBP05771 671 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 LIG1P18858 919 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 LONP1P36776 959 aaKnown RBP28.94■■■□□ 2.22
LIMD2-208ENST00000579814 RESTQ13127 1097 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 PUS10Q3MIT2 529 aaKnown RBP28.94■■■□□ 2.22
LIMD2-208ENST00000579814 C1orf186Q6ZWK4 172 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 ADGRD2Q7Z7M1 963 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 RBM23Q86U06 439 aaKnown RBP28.94■■■□□ 2.22
LIMD2-208ENST00000579814 CALML4Q96GE6 196 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 DRC1Q96MC2 740 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 TCF25Q9BQ70 676 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 RUSC1Q9BVN2 902 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 TIPINQ9BVW5 301 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 RNF39Q9H2S5 420 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 GIT1Q9Y2X7 761 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 HES2Q9Y543 173 aa28.94■■■□□ 2.22
LIMD2-208ENST00000579814 MYO7AQ13402 2215 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 ARID2Q68CP9 1835 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 H3BQ06 376 aaPredicted RBP28.93■■■□□ 2.22
LIMD2-208ENST00000579814 FSCN2O14926 492 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 HIP1RO75146 1068 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 NPTXRO95502 500 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 GALTP07902 379 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 GTF2F1P35269 517 aaKnown RBP eCLIP28.93■■■□□ 2.22
LIMD2-208ENST00000579814 NRIP1P48552 1158 aa28.93■■■□□ 2.22
LIMD2-208ENST00000579814 BMS1Q14692 1282 aaKnown RBP28.93■■■□□ 2.22
LIMD2-208ENST00000579814 TMC7Q7Z402 723 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms