RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 C15orf39Q6ZRI6 1047 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 RBM23Q86U06 439 aaKnown RBP3.84□□□□□ -1.8
CDH19-204ENST00000579658 JAZF1Q86VZ6 243 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 THNSL1Q8IYQ7 743 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 CRIPAKQ8N1N5 446 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 COLGALT1Q8NBJ5 622 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 CTCFLQ8NI51 663 aaPredicted RBP3.84□□□□□ -1.8
CDH19-204ENST00000579658 TSC1Q92574 1164 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 COPS5Q92905 334 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 WNT8BQ93098 351 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 ASB16Q96NS5 453 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 KLHL5Q96PQ7 755 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 MTA3Q9BTC8 594 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 ACBD3Q9H3P7 528 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 ELAC1Q9H777 363 aaKnown RBP3.84□□□□□ -1.8
CDH19-204ENST00000579658 ENTPD7Q9NQZ7 604 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 RXFP3Q9NSD7 469 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 GJB4Q9NTQ9 266 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 EPS15L1Q9UBC2 864 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 ZDHHC9Q9Y397 364 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 V9GY48 417 aaPredicted RBP3.84□□□□□ -1.8
CDH19-204ENST00000579658 REV3LO60673 3130 aa3.84□□□□□ -1.8
CDH19-204ENST00000579658 RIF1Q5UIP0 2472 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 M0QZ92 97 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ZBTB5O15062 677 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ZNF500O60304 480 aaPredicted RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 OFD1O75665 1012 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ARIH2O95376 493 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 TPM2P07951 284 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 SKIP12755 728 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 MAPK1P28482 360 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 HOXA13P31271 388 aaPredicted RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 SOX11P35716 441 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 RPS9P46781 194 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 MCM2P49736 904 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 METAP2P50579 478 aaKnown RBP eCLIP3.83□□□□□ -1.8
CDH19-204ENST00000579658 EVCP57679 992 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 STARD6P59095 220 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 RPS6P62753 249 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 ZSCAN23Q3MJ62 389 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 CELF3Q5SZQ8 465 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 SPOUT1Q5T280 376 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 IER5Q5VY09 327 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 UNQ6494/PRO21346Q6UXR6 183 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 KRTAP1-3Q8IUG1 177 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 FBXL16Q8N461 479 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 DCLK2Q8N568 766 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PJA1Q8NG27 643 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ANP32BQ92688 251 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 PGBD1Q96JS3 809 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PRIMPOLQ96LW4 560 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 TAAR1Q96RJ0 339 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 NOL7Q9UMY1 257 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 LHX6Q9UPM6 363 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 MRVI1Q9Y6F6 885 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 EPG5Q9HCE0 2579 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 KDM3AQ9Y4C1 1321 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PNMA6FA0A0J9YX94 578 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 JAK2O60674 1132 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PRMT3O60678 531 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ICMTO60725 284 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PAPLNO95428 1278 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 CFBP00751 764 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 FDPSP14324 419 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 CLDN10P78369 228 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 GHRHRQ02643 423 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 DPYDQ12882 1025 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 CUL4AQ13619 759 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PKP1Q13835 747 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 HSP90AA2PQ14568 343 aaPredicted RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 LPIN1Q14693 890 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 UBE2SQ16763 222 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 FBXO47Q5MNV8 452 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 WWC2Q6AWC2 1192 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 MCTP1Q6DN14 999 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 USP17L6PQ6QN14 398 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 SYNE3Q6ZMZ3 975 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 GPR149Q86SP6 731 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 NOP9Q86U38 636 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 CCDC83Q8IWF9 413 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 GIMAP8Q8ND71 665 aaPredicted RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 HDAC7Q8WUI4 952 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 INTS4Q96HW7 963 aaKnown RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 SPATA33Q96N06 139 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 MAP3K14Q99558 947 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 TCF25Q9BQ70 676 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 C16orf70Q9BSU1 422 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 SPZ1Q9BXG8 430 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 SLC26A6Q9BXS9 759 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 BCAS3Q9H6U6 928 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PRMT8Q9NR22 394 aaPredicted RBP3.83□□□□□ -1.8
CDH19-204ENST00000579658 ARHGEF3Q9NR81 526 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 KIAA1024Q9UPX6 916 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PCDHB7Q9Y5E2 793 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 PCDHA1Q9Y5I3 950 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 IRAK3Q9Y616 596 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 ACACBO00763 2458 aa3.83□□□□□ -1.8
CDH19-204ENST00000579658 RRN3P2A6NIE6 340 aa3.82□□□□□ -1.8
CDH19-204ENST00000579658 PFKFB2O60825 505 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms