RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 RHOBTB2Q9BYZ6 727 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 PRKD2Q9BZL6 878 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 IL25Q9H293 177 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 LY9Q9HBG7 655 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 FAM217BQ9NTX9 383 aaPredicted RBP14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SSX2IPQ9Y2D8 614 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 SAMM50Q9Y512 469 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 EVPLQ92817 2033 aa14.9□□□□□ -0.02
CDK5RAP3-213ENST00000579605 E7EWF7 191 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 HIP1O00291 1037 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NCAM2O15394 837 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 TGM5O43548 720 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PSAPP07602 524 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RETP07949 1114 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CYP21A2P08686 494 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PMLP29590 882 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 OR1G1P47890 313 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 GLUD2P49448 558 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ANTXR2P58335 489 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 MTAPQ13126 283 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 DRP2Q13474 957 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 IL31Q6EBC2 164 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 LAIR1Q6GTX8 287 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PRR23CQ6ZRP0 262 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CHD1LQ86WJ1 897 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 SMC5Q8IY18 1101 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF710Q8N1W2 664 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RSPH1Q8WYR4 309 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PGBD4Q96DM1 585 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 B3GALT6Q96L58 329 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ANO3Q9BYT9 981 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CDH7Q9ULB5 785 aa14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
CDK5RAP3-213ENST00000579605 A0A087WZ62 844 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 IPO5O00410 1097 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 DDAH1O94760 285 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PROS1P07225 676 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PFKPQ01813 784 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 AGMOQ6ZNB7 445 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PLEKHM2Q8IWE5 1019 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CELF5Q8N6W0 485 aaKnown RBP14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CLDN23Q96B33 292 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FDXACB1Q9BRP7 624 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 TMEM175Q9BSA9 504 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF577Q9BSK1 485 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PLEKHA4Q9H4M7 779 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RXFP1Q9HBX9 757 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NRBP2Q9NSY0 501 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZDHHC7Q9NXF8 308 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PCDHA10Q9Y5I2 948 aa14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZFP37Q9Y6Q3 630 aaPredicted RBP14.88□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FAM86B1E9PN63 330 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FOSP01100 380 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FAM86B2P0C5J1 330 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RPL17P18621 184 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NAPAP54920 295 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CSRP2Q16527 193 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RSPO2Q6UXX9 243 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 MTSS1LQ765P7 747 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 HDAC7Q8WUI4 952 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 DDX1Q92499 740 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 COL26A1Q96A83 441 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FAM167AQ96KS9 214 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NELL2Q99435 816 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 TRAIPQ9BWF2 469 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FAM126AQ9BYI3 521 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 OSBPL3Q9H4L5 887 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RIC8AQ9NPQ8 531 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PRMT8Q9NR22 394 aaPredicted RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 MARCH5Q9NX47 278 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NDRG2Q9UN36 371 aaKnown RBP14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 POLIQ9UNA4 740 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PCDHB2Q9Y5E7 798 aa14.87□□□□□ -0.03
CDK5RAP3-213ENST00000579605 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 F8W810 466 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF862O60290 1169 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF623O75123 536 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 IGHDP01880 384 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 OATP04181 439 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RAB27AP51159 221 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NRLP54845 237 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 NUCB1Q02818 461 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 SIM2Q14190 667 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 WWC2Q6AWC2 1192 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF746Q6NUN9 644 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZNF852Q6ZMS4 543 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 FGF13Q92913 245 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 PHF20Q9BVI0 1012 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 RSAD1Q9HA92 442 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 HEBP1Q9NRV9 189 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 KANSL3Q9P2N6 904 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZMIZ1Q9ULJ6 1067 aa14.86□□□□□ -0.03
CDK5RAP3-213ENST00000579605 C1QTNF9BB2RNN3 333 aa14.85□□□□□ -0.03
CDK5RAP3-213ENST00000579605 LRP3O75074 770 aa14.85□□□□□ -0.03
CDK5RAP3-213ENST00000579605 ZMYND10O75800 440 aa14.85□□□□□ -0.03
CDK5RAP3-213ENST00000579605 C1QTNF9P0C862 333 aa14.85□□□□□ -0.03
CDK5RAP3-213ENST00000579605 SREBF1P36956 1147 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms