RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RBL2Q08999 1139 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 TMEM62Q0P6H9 643 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 NCAPHQ15003 741 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 NELFCDQ8IXH7 590 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 KIAA0319LQ8IZA0 1049 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 KCNN1Q92952 543 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 CEP63Q96MT8 703 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 SCLT1Q96NL6 688 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 PPP1R16BQ96T49 567 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 NOC4LQ9BVI4 516 aaKnown RBP15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 TRIM5Q9C035 493 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 FANCLQ9NW38 375 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 TRAF3IP3Q9Y228 551 aa15.28■□□□□ 0.04
CSNK1D-209ENST00000578904 TRIM43BA6NCK2 446 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 K7ERI5 159 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 CKBP12277 381 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 PRKCSHP14314 528 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 EEF1GP26641 437 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 FXR1P51114 621 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 MRPS6P82932 125 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 MYBPC2Q14324 1141 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 NFIL3Q16649 462 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 SARM1Q6SZW1 724 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 RPAINQ86UA6 219 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 RHPN2Q8IUC4 686 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 NME8Q8N427 588 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 PRPF31Q8WWY3 499 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 TRIM43Q96BQ3 446 aaPredicted RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 SRRTQ9BXP5 876 aaKnown RBP15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 TMEM134Q9H6X4 195 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 POLD4Q9HCU8 107 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 TRPV2Q9Y5S1 764 aa15.27■□□□□ 0.04
CSNK1D-209ENST00000578904 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 DENND3A2RUS2 1198 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 KIAA0355O15063 1070 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 PPP1R37O75864 691 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 RAG1P15918 1043 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 SELPP16109 830 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 GLRA2P23416 452 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 PHKA2P46019 1235 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 CASP5P51878 434 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 ZNF618Q5T7W0 954 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 LRRC8DQ7L1W4 858 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 TMEM161BQ8NDZ6 487 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 ASAP3Q8TDY4 903 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 NLRP7Q8WX94 980 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 BICD1Q96G01 975 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 NLRP4Q96MN2 994 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 FIZ1Q96SL8 496 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 STRA6Q9BX79 667 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 CDY2AQ9Y6F7 541 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 TANC1Q9C0D5 1861 aa15.26■□□□□ 0.03
CSNK1D-209ENST00000578904 SIP14410 1827 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 TRIM49BA6NDI0 452 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 KIAA0391O15091 583 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 CYP2C18P33260 490 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 GPC3P51654 580 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 CCL23P55773 120 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 NLRP11P59045 1033 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 MGAT3Q09327 533 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 ADAM9Q13443 819 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 MAPK6Q16659 721 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 KIZQ2M2Z5 673 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 ZC2HC1CQ53FD0 456 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 CREBRFQ8IUR6 639 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 ZNF668Q96K58 619 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 NFKBIZQ9BYH8 718 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 INO80BQ9C086 356 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 FRMD4BQ9Y2L6 1034 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 NR2E3Q9Y5X4 410 aa15.25■□□□□ 0.03
CSNK1D-209ENST00000578904 KCNJ18B7U540 433 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 TIMP1P01033 207 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 SRGAP2CP0DJJ0 459 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 ZNF18P17022 549 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 SYN1P17600 705 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 NR2F2P24468 414 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 UBASH3AP57075 661 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 FANCCQ00597 558 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 NCBP1Q09161 790 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 CCDC173Q0VFZ6 552 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 CAPSQ13938 189 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 KCNJ12Q14500 433 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 PCBP1Q15365 356 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms