RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 CDH7Q9ULB5 785 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 ASCC3Q8N3C0 2202 aaKnown RBP12.63□□□□□ -0.39
GGA3-206ENST00000578773 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
GGA3-206ENST00000578773 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 IGKV6D-21A0A0A0MT36 114 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 PNMA6FA0A0J9YX94 578 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 DDX39AO00148 427 aaKnown RBP12.62□□□□□ -0.39
GGA3-206ENST00000578773 TGM5O43548 720 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 OFD1O75665 1012 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 RPL17P18621 184 aaKnown RBP12.62□□□□□ -0.39
GGA3-206ENST00000578773 PHKA2P46019 1235 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 GRM4Q14833 912 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 NOMO2Q5JPE7 1267 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 WDR44Q5JSH3 913 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 RSPO2Q6UXX9 243 aaPredicted RBP12.62□□□□□ -0.39
GGA3-206ENST00000578773 LINC01465Q8N7H1 131 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 ADAM32Q8TC27 787 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 ING5Q8WYH8 240 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 PHKBQ93100 1093 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 HERC2P3Q9BVR0 1158 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 JADE2Q9NQC1 790 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 HELLSQ9NRZ9 838 aa12.62□□□□□ -0.39
GGA3-206ENST00000578773 COL1A2P08123 1366 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 TMEM8BA6NDV4 472 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 K7ESF4 209 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 HBP1O60381 514 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 ATG7O95352 703 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 URODP06132 367 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 ADH1AP07327 375 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 RNASELQ05823 741 aaKnown RBP12.61□□□□□ -0.39
GGA3-206ENST00000578773 IFIT1BQ5T764 474 aaKnown RBP12.61□□□□□ -0.39
GGA3-206ENST00000578773 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 C12orf50Q8NA57 414 aaPredicted RBP12.61□□□□□ -0.39
GGA3-206ENST00000578773 PHF20Q9BVI0 1012 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 KCNH7Q9NS40 1196 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 HCFC1R1Q9NWW0 138 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 AKT3Q9Y243 479 aa12.61□□□□□ -0.39
GGA3-206ENST00000578773 PRG3Q9Y2Y8 225 aaPredicted RBP12.61□□□□□ -0.39
GGA3-206ENST00000578773 NRP1O14786 923 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 EFEMP2O95967 443 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 SOD2P04179 222 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 PCP11498 1178 aaKnown RBP12.6□□□□□ -0.39
GGA3-206ENST00000578773 EIF4BP23588 611 aaKnown RBP12.6□□□□□ -0.39
GGA3-206ENST00000578773 NRLP54845 237 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 MCMDC2Q4G0Z9 681 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 ZNF852Q6ZMS4 543 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 RNF168Q8IYW5 571 aaPredicted RBP12.6□□□□□ -0.39
GGA3-206ENST00000578773 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 PGBD1Q96JS3 809 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 RNF41Q9H4P4 317 aaPredicted RBP12.6□□□□□ -0.39
GGA3-206ENST00000578773 RXFP1Q9HBX9 757 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
GGA3-206ENST00000578773 DDX19BQ9UMR2 479 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 PLXNB3Q9ULL4 1909 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 CACNA1EQ15878 2313 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 SALL3Q9BXA9 1300 aa12.6□□□□□ -0.39
GGA3-206ENST00000578773 ADAMTS9Q9P2N4 1935 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 BACH1O14867 736 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 ZNF806P0C7X5 589 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 DARSP14868 501 aaKnown RBP12.59□□□□□ -0.39
GGA3-206ENST00000578773 GPC3P51654 580 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 DRP2Q13474 957 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 COL28A1Q2UY09 1125 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 ZNF484Q5JVG2 852 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 LILRA6Q6PI73 481 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 ABHD15Q6UXT9 468 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 LMAN1LQ9HAT1 526 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 KLK13Q9UKR3 277 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 GPSM3Q9Y4H4 160 aa12.59□□□□□ -0.39
GGA3-206ENST00000578773 PCNX2A6NKB5 2137 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 NCAM2O15394 837 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 CCL16O15467 120 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
GGA3-206ENST00000578773 GAS2O43903 313 aaKnown RBP12.58□□□□□ -0.4
GGA3-206ENST00000578773 ZMYND10O75800 440 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 POMCP01189 267 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 GLUD2P49448 558 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 PFKPQ01813 784 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 GRM2Q14416 872 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 AGMOQ6ZNB7 445 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 Q6ZS52 159 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 FAM43BQ6ZT52 329 aaPredicted RBP12.58□□□□□ -0.4
GGA3-206ENST00000578773 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 CEP68Q76N32 757 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 KBTBD6Q86V97 674 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 NPAS3Q8IXF0 933 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 AGO4Q9HCK5 861 aaKnown RBP12.58□□□□□ -0.4
GGA3-206ENST00000578773 ZDHHC7Q9NXF8 308 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 NFASCO94856 1347 aa12.58□□□□□ -0.4
GGA3-206ENST00000578773 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
GGA3-206ENST00000578773 ZNF213O14771 459 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms