RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 PCDHB2Q9Y5E7 798 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 MORC2Q9Y6X9 1032 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 INO80B-WBP1J3KQ70 363 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 TSPAN1O60635 241 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 LONP1P36776 959 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 NAMPTP43490 491 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 AMHR2Q16671 573 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 FAM187BQ17R55 369 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 CLLU1OSQ5K130 101 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 NOTUMQ6P988 496 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 MRPL10Q7Z7H8 261 aaKnown RBP15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 LRRC43Q8N309 656 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 CNNM3Q8NE01 707 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 PGBD4Q96DM1 585 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 TIPINQ9BVW5 301 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 C2orf40Q9H1Z8 148 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 CWH43Q9H720 699 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 PCDHB12Q9Y5F1 795 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 CLIC4Q9Y696 253 aa15.1■□□□□ 0.01
CSNK1D-208ENST00000578501 REV3LO60673 3130 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 LRRIQ4A6NIV6 560 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 E9PMD0 336 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 LAG3P18627 525 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 PTPAQ15257 358 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 TMEM119Q4V9L6 283 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 TIGD5Q53EQ6 642 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 UBXN11Q5T124 520 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 LRRC55Q6ZSA7 311 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 CABP7Q86V35 215 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 ZBTB8OSQ8IWT0 167 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 KLHL23Q8NBE8 558 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 RNF169Q8NCN4 708 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 IFT74Q96LB3 600 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 PNMA5Q96PV4 448 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 MRPL9Q9BYD2 267 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 FZD8Q9H461 694 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 PRMT7Q9NVM4 692 aaPredicted RBP15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 KCND2Q9NZV8 630 aa15.09■□□□□ 0.01
CSNK1D-208ENST00000578501 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 A0A1B0GUA9 196 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 CARNS1A5YM72 827 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 GRM6O15303 877 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 ITGB1P05556 798 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
CSNK1D-208ENST00000578501 ARF4P18085 180 aaPredicted RBP15.08■□□□□ 0
CSNK1D-208ENST00000578501 NCLP19338 710 aaKnown RBP15.08■□□□□ 0
CSNK1D-208ENST00000578501 UBA7P41226 1012 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 EFNA5P52803 228 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 UBE3AQ05086 875 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 SPOUT1Q5T280 376 aaKnown RBP15.08■□□□□ 0
CSNK1D-208ENST00000578501 RINT1Q6NUQ1 792 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 GLB1LQ6UWU2 654 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 KCNK18Q7Z418 384 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 SYT2Q8N9I0 419 aaPredicted RBP15.08■□□□□ 0
CSNK1D-208ENST00000578501 COLGALT1Q8NBJ5 622 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 SPPL3Q8TCT6 385 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 HELQQ8TDG4 1101 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 BSNDQ8WZ55 320 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 CCSER1Q9C0I3 900 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 CSRNP2Q9H175 543 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 UBN1Q9NPG3 1134 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 CNTNAP2Q9UHC6 1331 aa15.08■□□□□ 0
CSNK1D-208ENST00000578501 OFD1O75665 1012 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 GUCY2CP25092 1073 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 SLC12A3P55017 1021 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 PLCB3Q01970 1234 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 CAMK1Q14012 370 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 ZRSR1Q15695 479 aaKnown RBP15.07■□□□□ 0
CSNK1D-208ENST00000578501 MAPK6Q16659 721 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 AGMOQ6ZNB7 445 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 DEPTORQ8TB45 409 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 LPPQ93052 612 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 CALML4Q96GE6 196 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 DRC1Q96MC2 740 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 RUSC1Q9BVN2 902 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 CCDC113Q9H0I3 377 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 NSUN3Q9H649 340 aaKnown RBP15.07■□□□□ 0
CSNK1D-208ENST00000578501 ALG13Q9NP73 1137 aaKnown RBP15.07■□□□□ 0
CSNK1D-208ENST00000578501 KCNG1Q9UIX4 513 aa15.07■□□□□ 0
CSNK1D-208ENST00000578501 SRPRBQ9Y5M8 271 aaKnown RBP15.07■□□□□ 0
CSNK1D-208ENST00000578501 MEIS3P2A8K0S8 358 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 ACKR2O00590 384 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 INPPL1O15357 1258 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 NCK2O43639 380 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 PLA2G4BP0C869 781 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 PPM1AP35813 382 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 GRIN1Q05586 938 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 ZP2Q05996 745 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 COL19A1Q14993 1142 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 NOMO2Q5JPE7 1267 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 SLC27A1Q6PCB7 646 aa15.06■□□□□ 0
CSNK1D-208ENST00000578501 KCNT2Q6UVM3 1135 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms