RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 HCFC2Q9Y5Z7 792 aa16.64■□□□□ 0.25
RN7SL560P-201ENST00000577943 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 WNT7AO00755 349 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 DGAT1O75907 488 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 LYPLA2O95372 231 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 GALTP07902 379 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 HOXB8P17481 243 aaPredicted RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 GUCY1B3Q02153 619 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 TFDP1Q14186 410 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 SAFBQ15424 915 aaKnown RBP eCLIP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 TPRNQ4KMQ1 711 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 DDX53Q86TM3 631 aaKnown RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 FAM193BQ96PV7 902 aaPredicted RBP16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 ZBP1Q9H171 429 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 XPNPEP1Q9NQW7 623 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 KANSL3Q9P2N6 904 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 DNAJB4Q9UDY4 337 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
RN7SL560P-201ENST00000577943 MUC6Q6W4X9 2439 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 ZNF318Q5VUA4 2279 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 INO80B-WBP1J3KQ70 363 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 CLASP2O75122 1294 aaKnown RBP16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 AXLP30530 894 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 MCM7P33993 719 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 SLC11A1P49279 550 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 PTENP60484 403 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 NCBP1Q09161 790 aaKnown RBP16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 PCBP1Q15365 356 aaKnown RBP eCLIP16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 ZNF280BQ86YH2 543 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 CCDC83Q8IWF9 413 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 AUTS2Q8WXX7 1259 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 EDAQ92838 391 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
RN7SL560P-201ENST00000577943 POTEMA6NI47 508 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 CTSAP10619 480 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 ITGA4P13612 1032 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 RARRES1P49788 294 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 GIT2Q14161 759 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 CES5AQ6NT32 575 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 NOTUMQ6P988 496 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 CNNM3Q8NE01 707 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 PIGOQ8TEQ8 1089 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 BCL7CQ8WUZ0 217 aaPredicted RBP16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 CPB2Q96IY4 423 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 C8orf76Q96K31 380 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 FAN1Q9Y2M0 1017 aa16.61■□□□□ 0.25
RN7SL560P-201ENST00000577943 A0A087WWV3 80 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 TSPAN1O60635 241 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 DDHD2O94830 711 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 POMCP01189 267 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 ALDH2P05091 517 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 SP100P23497 879 aaPredicted RBP16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 AFF1P51825 1210 aaKnown RBP16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 ITIH3Q06033 890 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 POU5F1BQ06416 359 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 CAPSQ13938 189 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 ASAP3Q8TDY4 903 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 TMEM175Q9BSA9 504 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 EIF2AQ9BY44 585 aaKnown RBP16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 IPPQ9Y573 584 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 IRAK3Q9Y616 596 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 MTCL1Q9Y4B5 1905 aaKnown RBP16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 C2orf16Q68DN1 1984 aa16.6■□□□□ 0.25
RN7SL560P-201ENST00000577943 WDFY4Q6ZS81 3184 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 B4GALT3O60512 393 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 GLRA2P23416 452 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 ARL2P36404 184 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 ZXDAP98168 799 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 CCDC51Q96ER9 411 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 MFSD14AQ96MC6 490 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 LLPHQ9BRT6 129 aaKnown RBP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 TRIM6Q9C030 488 aaPredicted RBP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 CSRNP2Q9H175 543 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 ADAM7Q9H2U9 754 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
RN7SL560P-201ENST00000577943 NRP1O14786 923 aa16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 EPCAMP16422 314 aa16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 MBTD1Q05BQ5 628 aa16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 GNL2Q13823 731 aaKnown RBP16.58■□□□□ 0.24
RN7SL560P-201ENST00000577943 ZNF174Q15697 407 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms