RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 MSRAQ9UJ68 235 aa6.92□□□□□ -1.3
SMCHD1-202ENST00000577300 ST20-MTHFSA0A0A6YYL1 179 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 FOXN1O15353 648 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 HOXA3O43365 443 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 SEC24DO94855 1032 aaPredicted RBP6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 C21orf62-AS1Q17RA5 79 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 TKFCQ3LXA3 575 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 CCDC178Q5BJE1 867 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 ZBTB41Q5SVQ8 909 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 ZNF276Q8N554 614 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 ZNF610Q8N9Z0 462 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 FERMT2Q96AC1 680 aa6.91□□□□□ -1.3
SMCHD1-202ENST00000577300 LY86O95711 162 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 OCRLQ01968 901 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 CNNM4Q6P4Q7 775 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 RPUSD2Q8IZ73 545 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 AHI1Q8N157 1196 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 PPM1KQ8N3J5 372 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 TTPALQ9BTX7 342 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 FANCLQ9NW38 375 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 FZD1Q9UP38 647 aa6.9□□□□□ -1.3
SMCHD1-202ENST00000577300 NRP2O60462 931 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 LSP1P33241 339 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 WNT3AP56704 352 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 FAM214AQ32MH5 1076 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 TAS1R1Q7RTX1 841 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 FDXACB1Q9BRP7 624 aaPredicted RBP6.89□□□□□ -1.31
SMCHD1-202ENST00000577300 TRIM24O15164 1050 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 HK1P19367 917 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 NR4A1P22736 598 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 LSSP48449 732 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 SCNN1BP51168 640 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 MRPL49Q13405 166 aaKnown RBP6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 TERF2Q15554 542 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 LAIR1Q6GTX8 287 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 FAM83AQ86UY5 434 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 GLB1L3Q8NCI6 653 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 OR52N2Q8NGI0 321 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 OR5M3Q8NGP4 307 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 CPPED1Q9BRF8 314 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 WNT8AQ9H1J5 351 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 NUMBLQ9Y6R0 609 aa6.88□□□□□ -1.31
SMCHD1-202ENST00000577300 RECQL4O94761 1208 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 CFBP00751 764 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 ITGB1P05556 798 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 CASRP41180 1078 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 NANOS3P60323 173 aaKnown RBP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 SART3Q15020 963 aaKnown RBP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 SEPT7Q16181 437 aaKnown RBP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 DOK3Q7L591 496 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 RSAD2Q8WXG1 361 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 IL17RAQ96F46 866 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 GPR101Q96P66 508 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 TARS2Q9BW92 718 aaKnown RBP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 SPTLC3Q9NUV7 552 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 SORCS3Q9UPU3 1222 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 PLAAQ9Y263 795 aa6.87□□□□□ -1.31
SMCHD1-202ENST00000577300 A0A1W2PR48 441 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 PRSS38A1L453 326 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 DNAJC6O75061 913 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 NRG3P56975 720 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 COL10A1Q03692 680 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 LY6G5CQ5SRR4 150 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 LRRC55Q6ZSA7 311 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 FRMD7Q6ZUT3 714 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 CXorf67Q86X51 503 aaPredicted RBP6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 DHX37Q8IY37 1157 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 MSL3Q8N5Y2 521 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 ZG16BQ96DA0 208 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 FEZ1Q99689 392 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 EPC1Q9H2F5 836 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 HS3ST4Q9Y661 456 aa6.86□□□□□ -1.31
SMCHD1-202ENST00000577300 GZMKP49863 264 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 DUSP2Q05923 314 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 VPS72Q15906 364 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 IQSEC1Q6DN90 963 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 LMBR1LQ6UX01 489 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 GLB1L2Q8IW92 636 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 DNAJC10Q8IXB1 793 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 CPT1CQ8TCG5 803 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 LSM14BQ9BX40 385 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 CPEB1Q9BZB8 566 aaKnown RBP6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
SMCHD1-202ENST00000577300 LCHNA4D1U4 455 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 CDC45O75419 566 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 FKBP9O95302 570 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 ABHD16AO95870 558 aa6.84□□□□□ -1.31
SMCHD1-202ENST00000577300 GYPEP15421 78 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms