RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 GTPBP10A4D1E9 387 aaKnown RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 N4BP3O15049 544 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 KLRC1P26715 233 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 ACLYP53396 1101 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 PTENP60484 403 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 IRX5P78411 483 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 PTPN11Q06124 597 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 FIGNQ5HY92 759 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 MAEAQ7L5Y9 396 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 USP37Q86T82 979 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 RPAINQ86UA6 219 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 ASAP3Q8TDY4 903 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 TMEM143Q96AN5 459 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 CCDC113Q9H0I3 377 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 SUCLA2Q9P2R7 463 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
TSEN54-204ENST00000577197 FRMD4BQ9Y2L6 1034 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 ADGRA3Q8IWK6 1321 aa13.63□□□□□ -0.23
TSEN54-204ENST00000577197 K7ERI5 159 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 PMM2O15305 246 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 LDHAP00338 332 aaKnown RBP13.62□□□□□ -0.23
TSEN54-204ENST00000577197 SMIM10L2AP0DMW4 78 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 SMIM10L2BP0DMW5 78 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 PHKA2P46019 1235 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 MTIF2P46199 727 aaKnown RBP13.62□□□□□ -0.23
TSEN54-204ENST00000577197 KCNA1Q09470 495 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 CXCL17Q6UXB2 119 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 INTS8Q75QN2 995 aaKnown RBP13.62□□□□□ -0.23
TSEN54-204ENST00000577197 SRGAP1Q7Z6B7 1085 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 XXYLT1Q8NBI6 393 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 LMBR1Q8WVP7 490 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 BORCS6Q96GS4 357 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
TSEN54-204ENST00000577197 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSEN54-204ENST00000577197 LRRIQ4A6NIV6 560 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 HNRNPDLO14979 420 aaKnown RBP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 MAPK6Q16659 721 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 CCDC40Q4G0X9 1142 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 VWA3BQ502W6 1294 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 MIIPQ5JXC2 388 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 TAS1R3Q7RTX0 852 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 TRMT1LQ7Z2T5 733 aaKnown RBP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 ABHD8Q96I13 439 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 NUP58Q9BVL2 599 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 EDEM3Q9BZQ6 932 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 NDST4Q9H3R1 872 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 FZD8Q9H461 694 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 PRMT7Q9NVM4 692 aaPredicted RBP13.61□□□□□ -0.23
TSEN54-204ENST00000577197 HTTP42858 3142 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 EVPLQ92817 2033 aa13.61□□□□□ -0.23
TSEN54-204ENST00000577197 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 C17orf102A2RUQ5 167 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 ACKR2O00590 384 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 P4HA2O15460 535 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 STX10O60499 249 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 N4BP1O75113 896 aaKnown RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 TOM1L1O75674 476 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 AKAP3O75969 853 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 TBX2Q13207 712 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 KYAT1Q16773 422 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 KIAA0319LQ8IZA0 1049 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 METTL13Q8N6R0 699 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 RNF149Q8NC42 400 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 TRIM44Q96DX7 344 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 POLD4Q9HCU8 107 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 STARD7Q9NQZ5 370 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 HSPBP1Q9NZL4 362 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 GTF2IRD1Q9UHL9 959 aa13.6□□□□□ -0.23
TSEN54-204ENST00000577197 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.6□□□□□ -0.23
TSEN54-204ENST00000577197 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
TSEN54-204ENST00000577197 EXOC3O60645 756 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 CAND2O75155 1236 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 COL6A1P12109 1028 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 GTF2H1P32780 548 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 LIG4P49917 911 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 SOX10P56693 466 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 UBXN1Q04323 297 aa13.59□□□□□ -0.23
TSEN54-204ENST00000577197 DRP2Q13474 957 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms