RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ATL2Q8NHH9 583 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 RBM41Q96IZ5 413 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 CARD9Q9H257 536 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SMG5Q9UPR3 1016 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZBTB5O15062 677 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 RFX1P22670 979 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 AP3B2Q13367 1082 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ALCAMQ13740 583 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 DARS2Q6PI48 645 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZBED8Q8IZ13 594 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SERPINI1Q99574 410 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 CALN1Q9BXU9 219 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SCINQ9Y6U3 715 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SEC23IPQ9Y6Y8 1000 aaKnown RBP14□□□□□ -0.17
PCDHGB3-201ENST00000576222 ABCB11O95342 1321 aa14□□□□□ -0.17
PCDHGB3-201ENST00000576222 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 A0A087X0B3 334 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 STAT3P40763 770 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 PDIA2Q13087 525 aaKnown RBP13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 MEI1Q5TIA1 1274 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 RGS9BPQ6ZS82 235 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 XXYLT1Q8NBI6 393 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 DTNBP1Q96EV8 351 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 MIS12Q9H081 205 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 ALG6Q9Y672 507 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 NPHP3-ACAD11A0A0J9YXS1 232 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 TMEM253P0C7T8 217 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 KCNJ1P48048 391 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 GPS1Q13098 491 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 MEA1Q16626 185 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 CFAP36Q96G28 342 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 SCYL1Q96KG9 808 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 PACSIN1Q9BY11 444 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 KMT5AQ9NQR1 393 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 TCHHQ07283 1943 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 CFLARO15519 480 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 ERFP50548 548 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 PDCD2Q16342 344 aaPredicted RBP13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZFATQ9P243 1243 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 VWDEQ8N2E2 1590 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 FOXP2O15409 715 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 MIEF2Q96C03 454 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 NPHS2Q9NP85 383 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 MINPP1Q9UNW1 487 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 APOBEC2Q9Y235 224 aaKnown RBP13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 SSX2IPQ9Y2D8 614 aa13.99□□□□□ -0.17
PCDHGB3-201ENST00000576222 hCG_2014768A0A024R1R8 64 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 GPC4O75487 556 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ABCB5Q2M3G0 1257 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SUPT20HQ8NEM7 779 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 GABPB2Q8TAK5 448 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 NAF1Q96HR8 494 aaKnown RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 FAM20AQ96MK3 541 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 L3MBTL1Q9Y468 752 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SERPINB4P48594 390 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 AMPD2Q01433 879 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 MAPK7Q13164 816 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 RASSF3Q86WH2 238 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 UBN1Q9NPG3 1134 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 CEP170BQ9Y4F5 1589 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 CLDN3O15551 220 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRAPPC3O43617 180 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 LPXNO60711 386 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 RTN2O75298 545 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 KITP10721 976 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ALAS1P13196 640 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 MX2P20592 715 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 VAMP7P51809 220 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ZNF844Q08AG5 666 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 PPP2R5CQ13362 524 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 CENPPQ6IPU0 288 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SYDE1Q6ZW31 735 aaPredicted RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 EPS8L3Q8TE67 593 aaKnown RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 RBM15Q96T37 977 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 TRIM56Q9BRZ2 755 aaKnown RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 GDF3Q9NR23 364 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ANKFY1Q9P2R3 1169 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ABL1P00519 1130 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SAT1P21673 171 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 DEUP1Q05D60 604 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 PCGF5Q86SE9 256 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 FBXO25Q8TCJ0 367 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 EFHD1Q9BUP0 239 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 ADAM33Q9BZ11 813 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SEMA6BQ9H3T3 888 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 C15orf41Q9Y2V0 281 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 SLC4A7Q9Y6M7 1214 aa13.98□□□□□ -0.17
PCDHGB3-201ENST00000576222 LRRIQ4A6NIV6 560 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 F8VZ95 297 aa13.97□□□□□ -0.17
PCDHGB3-201ENST00000576222 ERVK-9P63128 1117 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms