RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TSPYL2Q9H2G4 693 aaPredicted RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 NXF3Q9H4D5 531 aaKnown RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CACNG4Q9UBN1 327 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 HPSEQ9Y251 543 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 PPME1Q9Y570 386 aa8.73□□□□□ -1.01
CCDC40-215ENST00000576033 TDRD15B5MCY1 1934 aaKnown RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 ABHD14A-ACY1A0A1B0GW23 586 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 C9IYK1 514 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 K7ENM7 598 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 GPR182O15218 404 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 MEFVO15553 781 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 TLL1O43897 1013 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 GJB5O95377 273 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 NPTXRO95502 500 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 AMHP03971 560 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 PRKCBP05771 671 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 KRT18P05783 430 aaKnown RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 LINC00271P0C7V0 271 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 PLS3P13797 630 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 SFPQP23246 707 aaKnown RBP eCLIP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 NAMPTP43490 491 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 KCNA1Q09470 495 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 MXD4Q14582 209 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 TWF2Q6IBS0 349 aaKnown RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 CCDC73Q6ZRK6 1079 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 TMEM192Q8IY95 271 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 SMG8Q8ND04 991 aaKnown RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 DEPTORQ8TB45 409 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 KIFAP3Q92845 792 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 APBB2Q92870 758 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 TOP1MTQ969P6 601 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 TIFAQ96CG3 184 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 ZBTB45Q96K62 511 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 SLC9A7Q96T83 725 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 JPH2Q9BR39 696 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 C17orf80Q9BSJ5 609 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 APOL6Q9BWW8 343 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 GZF1Q9H116 711 aaPredicted RBP8.72□□□□□ -1.01
CCDC40-215ENST00000576033 PDZD7Q9H5P4 517 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 KMT5AQ9NQR1 393 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 RGS18Q9NS28 235 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 ARHGAP28Q9P2N2 729 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 STK17AQ9UEE5 414 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 KCNH3Q9ULD8 1083 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 STK24Q9Y6E0 443 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 CNTNAP2Q9UHC6 1331 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 ZMYM2Q9UBW7 1377 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 VCANP13611 3396 aa8.72□□□□□ -1.01
CCDC40-215ENST00000576033 A0A1W2PPC1 479 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 LINC01553A4QN01 128 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 F8W810 466 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 TBCAO75347 108 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ERLIN2O94905 339 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 FAM13AO94988 1023 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 PARNO95453 639 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 HARSP12081 509 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 IDEP14735 1019 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 AKAP5P24588 427 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SARSP49591 514 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF131P52739 623 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 NCKAP1LP55160 1127 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SMAD3P84022 425 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 COASYQ13057 564 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 DMP1Q13316 513 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 TFDP1Q14186 410 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ODR4Q5SWX8 454 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 CCDC183Q5T5S1 534 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ADALQ6DHV7 355 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SLC39A4Q6P5W5 647 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 RBM43Q6ZSC3 357 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SV2BQ7L1I2 683 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SRGAP1Q7Z6B7 1085 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZBTB33Q86T24 672 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZNF598Q86UK7 904 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ECHDC2Q86YB7 292 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 MYCT1Q8N699 235 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 USP38Q8NB14 1042 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 TMEM161BQ8NDZ6 487 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZSWIM2Q8NEG5 633 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 HELQQ8TDG4 1101 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 GDPD5Q8WTR4 605 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 SYAP1Q96A49 352 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 FAM84AQ96KN4 292 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 DRC1Q96MC2 740 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 GUCD1Q96NT3 240 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 YME1L1Q96TA2 773 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 TARS2Q9BW92 718 aaKnown RBP8.71□□□□□ -1.02
CCDC40-215ENST00000576033 TRIM9Q9C026 710 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 FZD8Q9H461 694 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 FAM105AQ9NUU6 356 aa8.71□□□□□ -1.02
CCDC40-215ENST00000576033 KBTBD4Q9NVX7 518 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms