RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 RAB17Q9H0T7 212 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 SEPT11Q9NVA2 429 aaKnown RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 ALG6Q9Y672 507 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 PFASO15067 1338 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 ATXN2Q99700 1313 aaKnown RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 RAD17O75943 681 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 FTLP02792 175 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 VCAM1P19320 739 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 QARSP47897 775 aaKnown RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 GCLMP48507 274 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 GPC5P78333 572 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 KCTD19Q17RG1 926 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 DUPD1Q68J44 220 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 RUFY4Q6ZNE9 571 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 MIGA2Q7L4E1 593 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 RPUSD2Q8IZ73 545 aaKnown RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 XXYLT1Q8NBI6 393 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 ALG3Q92685 438 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 DPH5Q9H2P9 285 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 VEZTQ9HBM0 779 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 ERVK-5Q9HDB9 667 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 HSPBP1Q9NZL4 362 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 NFIBO00712 420 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 PPFIA2O75334 1257 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 CHRNB2P17787 502 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 NCKAP1LP55160 1127 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MRPS9P82933 396 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 DR1Q01658 176 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 SPP2Q13103 211 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 ZNF211Q13398 564 aaPredicted RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 DHX34Q14147 1143 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 NAA35Q5VZE5 725 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 PCNX4Q63HM2 1172 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 TADA2BQ86TJ2 420 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 FAM83AQ86UY5 434 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 SPATS2Q86XZ4 545 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MTMR14Q8NCE2 650 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 ZSWIM2Q8NEG5 633 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 ZNF473Q8WTR7 871 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 UBLCP1Q8WVY7 318 aaPredicted RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 PCDHB18PQ96TA0 734 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 ERP44Q9BS26 406 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 TIPINQ9BVW5 301 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 GOLGA6L10A0A0M3HER8 536 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MIF4GDA9UHW6 222 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 RTN2O75298 545 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MTA2O94776 668 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 DHX9Q08211 1270 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 HAUS6Q7Z4H7 955 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 PACS2Q86VP3 889 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 NLRP14Q86W24 1093 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MCF2L2Q86YR7 1114 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 RPS6KC1Q96S38 1066 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 TMEM117Q9H0C3 514 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 TMOD4Q9NZQ9 345 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 CTTNBP2NLQ9P2B4 639 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 NOCTQ9UK39 431 aaKnown RBP9.66□□□□□ -0.86
NCBP3-204ENST00000574911 BCS1LQ9Y276 419 aa9.66□□□□□ -0.86
NCBP3-204ENST00000574911 MYH11P35749 1972 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 SGPL1O95470 568 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 YWHABP31946 246 aaKnown RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 COPB2P35606 906 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 PTGIRP43119 386 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 DRG2P55039 364 aaKnown RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 TTC31Q49AM3 519 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 SYTL5Q8TDW5 730 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 KAT5Q92993 513 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ZSWIM1Q9BR11 485 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 TBC1D22BQ9NU19 505 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 SLC12A6Q9UHW9 1150 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 COL4A5P29400 1685 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ASTN2O75129 1339 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 FAM170AA1A519 330 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 BACH1O14867 736 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ASNSP08243 561 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 HSPA6P17066 643 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 CTNNA2P26232 953 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 HPDP32754 393 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 PEX5P50542 639 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 AADACL2Q6P093 401 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ADAT2Q7Z6V5 191 aaKnown RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 NOP9Q86U38 636 aaKnown RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 C4orf19Q8IY42 314 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 UBL4BQ8N7F7 174 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 PRPF38AQ8NAV1 312 aaKnown RBP9.65□□□□□ -0.86
NCBP3-204ENST00000574911 MYCBPAPQ8TBZ2 947 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 MORC4Q8TE76 937 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 KRT35Q92764 455 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 ZBED3Q96IU2 234 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms