RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SLC39A4Q6P5W5 647 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 GOLGA5Q8TBA6 731 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 NOC3LQ8WTT2 800 aaKnown RBP26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 THAP9Q9H5L6 903 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 CDHR5Q9HBB8 845 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 PRKCBP05771 671 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 IQCF3P0C7M6 154 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 MNX1P50219 401 aaPredicted RBP26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 MAPK6Q16659 721 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 IFNLR1Q8IU57 520 aaPredicted RBP26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 ANP32BQ92688 251 aaKnown RBP26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 MCOLN1Q9GZU1 580 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 NOD1Q9Y239 953 aa26.35■■□□□ 1.81
ATPAF1-213ENST00000574428 TTLL13PA6NNM8 815 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 ARVCFO00192 962 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 CDK11BP21127 795 aaKnown RBP26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 ADAM9Q13443 819 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 CREBRFQ8IUR6 639 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 ZC3H3Q8IXZ2 948 aaKnown RBP26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 NME8Q8N427 588 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 OSMRQ99650 979 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 TARS2Q9BW92 718 aaKnown RBP26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 TRPV6Q9H1D0 765 aa26.34■■□□□ 1.81
ATPAF1-213ENST00000574428 LIG4P49917 911 aa26.33■■□□□ 1.81
ATPAF1-213ENST00000574428 CYP2J2P51589 502 aa26.33■■□□□ 1.81
ATPAF1-213ENST00000574428 CDC42EP1Q00587 391 aa26.33■■□□□ 1.81
ATPAF1-213ENST00000574428 CBWD1Q9BRT8 395 aa26.33■■□□□ 1.81
ATPAF1-213ENST00000574428 FZD8Q9H461 694 aa26.33■■□□□ 1.81
ATPAF1-213ENST00000574428 KCNJ18B7U540 433 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 B4GALT4O60513 344 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 FGFR1OPO95684 399 aaKnown RBP26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 GJA8P48165 433 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 CCDC173Q0VFZ6 552 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 KCNJ12Q14500 433 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 CEP63Q96MT8 703 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 SENP6Q9GZR1 1112 aaPredicted RBP26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 PCIF1Q9H4Z3 704 aa26.33■■□□□ 1.8
ATPAF1-213ENST00000574428 CETN3O15182 167 aa26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 B4GALT5O43286 388 aa26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 RPL13P26373 211 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 ADSSP30520 456 aa26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 NFIL3Q16649 462 aa26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 RSPH3Q86UC2 560 aa26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 CNOT6LQ96LI5 555 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 MRPL4Q9BYD3 311 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 GCOM2Q9BZD3 368 aaPredicted RBP26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 CGNQ9P2M7 1197 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-213ENST00000574428 RBAK-RBAKDNI3L0D1 243 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 PIGRP01833 764 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 CTSHP09668 335 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 MRPS6P82932 125 aaKnown RBP26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 PTK7Q13308 1070 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 TCP11X2Q5H9J9 407 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 ARMCX5Q6P1M9 558 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 DIS3LQ8TF46 1054 aaKnown RBP26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 DHX38Q92620 1227 aaKnown RBP26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 PPP1R9BQ96SB3 815 aa26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 PRMT7Q9NVM4 692 aaPredicted RBP26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 MAGEC2Q9UBF1 373 aaPredicted RBP26.31■■□□□ 1.8
ATPAF1-213ENST00000574428 ACKR2O00590 384 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 FGFR4P22455 802 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 THPOP40225 353 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 CDK7P50613 346 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 SNRPFP62306 86 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 FANCCQ00597 558 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 PRPF4BQ13523 1007 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 CEP135Q66GS9 1140 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 SRGAP1Q7Z6B7 1085 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 FAM114A1Q8IWE2 563 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 DMAC2Q9NW81 257 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 DARSP14868 501 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 CASP4P49662 377 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 AMHR2Q16671 573 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 C12orf56Q8IXR9 622 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 TMEM40Q8WWA1 233 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 POMGNT1Q8WZA1 660 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 ZBTB45Q96K62 511 aaPredicted RBP26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 CELF4Q9BZC1 486 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 HSPBP1Q9NZL4 362 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 ANKFY1Q9P2R3 1169 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 CDY2AQ9Y6F7 541 aa26.3■■□□□ 1.8
ATPAF1-213ENST00000574428 AKAP3O75969 853 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 SERPINC1P01008 464 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 CRYBB1P53674 252 aaPredicted RBP26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 ATN1P54259 1190 aaPredicted RBP26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 SNX17Q15036 470 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 FAM187BQ17R55 369 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 ZPBP2Q6X784 338 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 FILIP1Q7Z7B0 1213 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 RPAINQ86UA6 219 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 SLC9A9Q8IVB4 645 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 ZSWIM2Q8NEG5 633 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 ACO2Q99798 780 aaKnown RBP26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 TRPV2Q9Y5S1 764 aa26.29■■□□□ 1.8
ATPAF1-213ENST00000574428 M0QZ92 97 aa26.28■■□□□ 1.8
ATPAF1-213ENST00000574428 EEF1GP26641 437 aaKnown RBP26.28■■□□□ 1.8
ATPAF1-213ENST00000574428 SPAG1Q07617 926 aa26.28■■□□□ 1.8
ATPAF1-213ENST00000574428 KRT31Q15323 416 aa26.28■■□□□ 1.8
ATPAF1-213ENST00000574428 TMEM132AQ24JP5 1023 aa26.28■■□□□ 1.8
ATPAF1-213ENST00000574428 SARM1Q6SZW1 724 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms