RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 C2orf40Q9H1Z8 148 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 SMC3Q9UQE7 1217 aa18.3■□□□□ 0.52
TVP23B-206ENST00000574226 TSPAN1O60635 241 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 OFD1O75665 1012 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 CYP11B2P19099 503 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 GLRA2P23416 452 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 GJB2P29033 226 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 CCT6AP40227 531 aaKnown RBP18.29■□□□□ 0.52
TVP23B-206ENST00000574226 TOB1P50616 345 aaPredicted RBP18.29■□□□□ 0.52
TVP23B-206ENST00000574226 BCAR1P56945 870 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 MBTD1Q05BQ5 628 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 SMAD4Q13485 552 aaKnown RBP18.29■□□□□ 0.52
TVP23B-206ENST00000574226 PPP2R5AQ15172 486 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 POTEGQ6S5H5 508 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 DTHD1Q6ZMT9 781 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 ZBTB8OSQ8IWT0 167 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 ASAP3Q8TDY4 903 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 NECAB3Q96P71 396 aaPredicted RBP18.29■□□□□ 0.52
TVP23B-206ENST00000574226 TCF25Q9BQ70 676 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 CSRNP2Q9H175 543 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 ENTPD7Q9NQZ7 604 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 TBC1D13Q9NVG8 400 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 HCSTQ9UBK5 93 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 CD207Q9UJ71 328 aa18.29■□□□□ 0.52
TVP23B-206ENST00000574226 ITGA4P13612 1032 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 ERVFC1P60507 584 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 GIT2Q14161 759 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 SMAD2Q15796 467 aaKnown RBP18.28■□□□□ 0.52
TVP23B-206ENST00000574226 DUSP6Q16828 381 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 UBXN11Q5T124 520 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 PADI6Q6TGC4 694 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 TMC7Q7Z402 723 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 LPPQ93052 612 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
TVP23B-206ENST00000574226 C1QTNF1Q9BXJ1 281 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 TRIM6Q9C030 488 aaPredicted RBP18.28■□□□□ 0.52
TVP23B-206ENST00000574226 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.28■□□□□ 0.52
TVP23B-206ENST00000574226 PRMT7Q9NVM4 692 aaPredicted RBP18.28■□□□□ 0.52
TVP23B-206ENST00000574226 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 ZMYM2Q9UBW7 1377 aa18.28■□□□□ 0.52
TVP23B-206ENST00000574226 LRRIQ4A6NIV6 560 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 INPPL1O15357 1258 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.52
TVP23B-206ENST00000574226 CSPG5O95196 566 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 EYA4O95677 639 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 COASYQ13057 564 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 SMC1AQ14683 1233 aaKnown RBP18.27■□□□□ 0.52
TVP23B-206ENST00000574226 FAM187BQ17R55 369 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 CDCA2Q69YH5 1023 aaPredicted RBP18.27■□□□□ 0.52
TVP23B-206ENST00000574226 SLC27A1Q6PCB7 646 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 TMEM184AQ6ZMB5 413 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 AGMOQ6ZNB7 445 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 ADGRD2Q7Z7M1 963 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 GJD3Q8N144 294 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 KIFAP3Q92845 792 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 MSLNLQ96KJ4 702 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 FAM193BQ96PV7 902 aaPredicted RBP18.27■□□□□ 0.52
TVP23B-206ENST00000574226 TMEM175Q9BSA9 504 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 INPP5FQ9Y2H2 1132 aa18.27■□□□□ 0.52
TVP23B-206ENST00000574226 MUC3AQ02505 3323 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 A0A1B0GUA9 196 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 MBTPS2O43462 519 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 TBX10O75333 385 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 IL9P15248 144 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 PDCP20941 246 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 NAMPTP43490 491 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 EFNA5P52803 228 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 AMHR2Q16671 573 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 DDX53Q86TM3 631 aaKnown RBP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 RBM23Q86U06 439 aaKnown RBP18.26■□□□□ 0.51
TVP23B-206ENST00000574226 ADHFE1Q8IWW8 467 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 SNX29Q8TEQ0 813 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 IGSF21Q96ID5 467 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 IFT74Q96LB3 600 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 NRDE2Q9H7Z3 1164 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 KIAA1024Q9UPX6 916 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 DNM3Q9UQ16 869 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 GIT1Q9Y2X7 761 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 IPPQ9Y573 584 aa18.26■□□□□ 0.51
TVP23B-206ENST00000574226 PHLPP2Q6ZVD8 1323 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 LINC01565O15544 149 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 NR1I2O75469 434 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 BMP15O95972 392 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 ALDH2P05091 517 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 GALTP07902 379 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 ARF4P18085 180 aaPredicted RBP18.25■□□□□ 0.51
TVP23B-206ENST00000574226 PBX3P40426 434 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 ATP2C1P98194 919 aaPredicted RBP18.25■□□□□ 0.51
TVP23B-206ENST00000574226 DLX2Q07687 328 aaPredicted RBP18.25■□□□□ 0.51
TVP23B-206ENST00000574226 NBR1Q14596 966 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 LONRF3Q496Y0 759 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 PLPP4Q5VZY2 271 aa18.25■□□□□ 0.51
TVP23B-206ENST00000574226 MRPL43Q8N983 215 aaKnown RBP18.25■□□□□ 0.51
TVP23B-206ENST00000574226 SMRP1Q8NCR6 262 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms