RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PHKBQ93100 1093 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 SHDQ96IW2 340 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 HERC2P3Q9BVR0 1158 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 RSAD1Q9HA92 442 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 ANO2Q9NQ90 1003 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
CTNS-208ENST00000574218 EPS15L1Q9UBC2 864 aa13.41□□□□□ -0.26
CTNS-208ENST00000574218 NCOR2Q9Y618 2525 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 NR1I2O75469 434 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 GLUD2P49448 558 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 RSPO4Q2I0M5 234 aaPredicted RBP13.4□□□□□ -0.26
CTNS-208ENST00000574218 XKR3Q5GH77 459 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 GET4Q7L5D6 327 aaPredicted RBP13.4□□□□□ -0.26
CTNS-208ENST00000574218 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 ZNF280BQ86YH2 543 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 RPS6KC1Q96S38 1066 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 MYADMQ96S97 322 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 RIT2Q99578 217 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 RHOBTB2Q9BYZ6 727 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
CTNS-208ENST00000574218 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 PRG3Q9Y2Y8 225 aaPredicted RBP13.4□□□□□ -0.26
CTNS-208ENST00000574218 PCDHB2Q9Y5E7 798 aa13.4□□□□□ -0.26
CTNS-208ENST00000574218 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 NRP1O14786 923 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 POMCP01189 267 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 MYBP10242 640 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 CIITAP33076 1130 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 OR1G1P47890 313 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 FUT2Q10981 343 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 DRP2Q13474 957 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 UGCGQ16739 394 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 DCLK2Q8N568 766 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 GPR161Q8N6U8 529 aaKnown RBP13.39□□□□□ -0.27
CTNS-208ENST00000574218 CCDC148Q8NFR7 591 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 UNC45AQ9H3U1 944 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 DLL3Q9NYJ7 618 aa13.39□□□□□ -0.27
CTNS-208ENST00000574218 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTNS-208ENST00000574218 TPRP12270 2363 aaKnown RBP13.39□□□□□ -0.27
CTNS-208ENST00000574218 DDX11L8A8MPP1 907 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 MSH4O15457 936 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 LILRB3O75022 631 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
CTNS-208ENST00000574218 RFPL2O75678 378 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 DDHD2O94830 711 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 NECTIN1Q15223 517 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 TARBP2Q15633 366 aaKnown RBP13.38□□□□□ -0.27
CTNS-208ENST00000574218 AGMOQ6ZNB7 445 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 DHX32Q7L7V1 743 aaKnown RBP13.38□□□□□ -0.27
CTNS-208ENST00000574218 CNNM3Q8NE01 707 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 HDAC7Q8WUI4 952 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 TCEANC2Q96MN5 208 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
CTNS-208ENST00000574218 BCO2Q9BYV7 579 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 PLEKHA4Q9H4M7 779 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 SPATA6Q9NWH7 488 aaPredicted RBP13.38□□□□□ -0.27
CTNS-208ENST00000574218 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 DOCK6Q96HP0 2047 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 DNAH14Q0VDD8 3507 aa13.38□□□□□ -0.27
CTNS-208ENST00000574218 SPTLC1O15269 473 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 TEX28O15482 410 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 LAMTOR5O43504 91 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 GAS2O43903 313 aaKnown RBP13.37□□□□□ -0.27
CTNS-208ENST00000574218 LAMP2P13473 410 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 ITGA4P13612 1032 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 RCAN1P53805 252 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 COL9A3Q14050 684 aaPredicted RBP13.37□□□□□ -0.27
CTNS-208ENST00000574218 PALB2Q86YC2 1186 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 ATRIPQ8WXE1 791 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 LENG9Q96B70 501 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 CNTNAP3Q9BZ76 1288 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 FOXQ1Q9C009 403 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 SLC2A4RGQ9NR83 387 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTNS-208ENST00000574218 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 ZFP37Q9Y6Q3 630 aaPredicted RBP13.37□□□□□ -0.27
CTNS-208ENST00000574218 FRYLO94915 3013 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 EPG5Q9HCE0 2579 aa13.37□□□□□ -0.27
CTNS-208ENST00000574218 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 IGKV6-21A0A0C4DH24 114 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 B4GALT3O60512 393 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.274e-15■■■■■ 36.5
CTNS-208ENST00000574218 MAFO75444 373 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms