RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 IGSF21Q96ID5 467 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 HSD17B14Q9BPX1 270 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 RSAD1Q9HA92 442 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 XPNPEP1Q9NQW7 623 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 DNAJB4Q9UDY4 337 aa23.54■■□□□ 1.36
CHRNB1-206ENST00000574054 CLASP2O75122 1294 aaKnown RBP23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 HOXB8P17481 243 aaPredicted RBP23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 ST3GAL1Q11201 340 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 TFDP1Q14186 410 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 MXD4Q14582 209 aaPredicted RBP23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 SAFBQ15424 915 aaKnown RBP eCLIP23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 TPRNQ4KMQ1 711 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 UBXN11Q5T124 520 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 ZNF280BQ86YH2 543 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 BCL7CQ8WUZ0 217 aaPredicted RBP23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 ZBP1Q9H171 429 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 ANKEF1Q9NU02 776 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 HCFC2Q9Y5Z7 792 aa23.53■■□□□ 1.36
CHRNB1-206ENST00000574054 INO80B-WBP1J3KQ70 363 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 LYPLA2O95372 231 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 SP100P23497 879 aaPredicted RBP23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 MCM7P33993 719 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 HFE2Q6ZVN8 426 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 MRPL10Q7Z7H8 261 aaKnown RBP23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 DDX53Q86TM3 631 aaKnown RBP23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 CCDC83Q8IWF9 413 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 ASAP3Q8TDY4 903 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 EDAQ92838 391 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 FAM193BQ96PV7 902 aaPredicted RBP23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 LIMCH1Q9UPQ0 1083 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 CNTNAP2Q9UHC6 1331 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 ARID2Q68CP9 1835 aa23.52■■□□□ 1.36
CHRNB1-206ENST00000574054 A0A087WWV3 80 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 POTEMA6NI47 508 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 B4GALT3O60512 393 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 DGAT1O75907 488 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 AFF1P51825 1210 aaKnown RBP23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 PTENP60484 403 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 NCBP1Q09161 790 aaKnown RBP23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 PIGOQ8TEQ8 1089 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 CPB2Q96IY4 423 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 MTMR9Q96QG7 549 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 TMEM60Q9H2L4 133 aa23.51■■□□□ 1.35
CHRNB1-206ENST00000574054 WDFY4Q6ZS81 3184 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 TSPAN1O60635 241 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 POMCP01189 267 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 ITGA4P13612 1032 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 NCLP19338 710 aaKnown RBP23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 CAPSQ13938 189 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 CES5AQ6NT32 575 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 NOTUMQ6P988 496 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 C8orf76Q96K31 380 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 EIF2AQ9BY44 585 aaKnown RBP23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 TSHZ2Q9NRE2 1034 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 KANSL3Q9P2N6 904 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 CDH22Q9UJ99 828 aa23.5■■□□□ 1.35
CHRNB1-206ENST00000574054 USO1O60763 962 aaKnown RBP23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 DDHD2O94830 711 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 CTSAP10619 480 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 AXLP30530 894 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 RARRES1P49788 294 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 PCBP1Q15365 356 aaKnown RBP eCLIP23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 SMG8Q8ND04 991 aaKnown RBP23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 CNNM3Q8NE01 707 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 CCDC51Q96ER9 411 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 POLR3FQ9H1D9 316 aaPredicted RBP23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 IPPQ9Y573 584 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 TECTAO75443 2155 aa23.49■■□□□ 1.35
CHRNB1-206ENST00000574054 SSBP05455 408 aaKnown RBP eCLIP23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 ARL2P36404 184 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 ZXDAP98168 799 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 GIT2Q14161 759 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 RARS2Q5T160 578 aaKnown RBP23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 MFSD14AQ96MC6 490 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 APOL6Q9BWW8 343 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 VN1R3Q9BXE9 311 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 ADAM7Q9H2U9 754 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 UBN1Q9NPG3 1134 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 FAN1Q9Y2M0 1017 aa23.48■■□□□ 1.35
CHRNB1-206ENST00000574054 TMEM221A6NGB7 291 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 M0R296 226 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 ALDH2P05091 517 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 EPCAMP16422 314 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 GLRA2P23416 452 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 MBTD1Q05BQ5 628 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 ITIH3Q06033 890 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 TRIM67Q6ZTA4 783 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 MAEAQ7L5Y9 396 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 ZBTB33Q86T24 672 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 IFNLR1Q8IU57 520 aaPredicted RBP23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 C12orf76Q8N812 135 aaPredicted RBP23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 TMEM175Q9BSA9 504 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 TRIM6Q9C030 488 aaPredicted RBP23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 CSRNP2Q9H175 543 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 DZANK1Q9NVP4 752 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 PRG3Q9Y2Y8 225 aaPredicted RBP23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 HES2Q9Y543 173 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 IRAK3Q9Y616 596 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 PIEZO1Q92508 2521 aa23.47■■□□□ 1.35
CHRNB1-206ENST00000574054 WEE2P0C1S8 567 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms