RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 TMEM184AQ6ZMB5 413 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 ZNF280BQ86YH2 543 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 SMRP1Q8NCR6 262 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 PPP2R3CQ969Q6 453 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 NACC1Q96RE7 527 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 TCF25Q9BQ70 676 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 EIF2AQ9BY44 585 aaKnown RBP19.37■□□□□ 0.69
SMG6-214ENST00000573827 POLR3FQ9H1D9 316 aaPredicted RBP19.37■□□□□ 0.69
SMG6-214ENST00000573827 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 C11orf16Q9NQ32 467 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 CD207Q9UJ71 328 aa19.37■□□□□ 0.69
SMG6-214ENST00000573827 BARX2Q9UMQ3 279 aaPredicted RBP19.37■□□□□ 0.69
SMG6-214ENST00000573827 MUC6Q6W4X9 2439 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 NT5C1B-RDH14C9J2C7 533 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 B4GALT5O43286 388 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 ST18O60284 1047 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 USO1O60763 962 aaKnown RBP19.36■□□□□ 0.69
SMG6-214ENST00000573827 GALTP07902 379 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 PLPP4Q5VZY2 271 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 CDCA2Q69YH5 1023 aaPredicted RBP19.36■□□□□ 0.69
SMG6-214ENST00000573827 IGSF22Q8N9C0 903 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 BSNDQ8WZ55 320 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 CCDC51Q96ER9 411 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 CDCA3Q99618 268 aaPredicted RBP19.36■□□□□ 0.69
SMG6-214ENST00000573827 NGRNQ9NPE2 291 aaKnown RBP19.36■□□□□ 0.69
SMG6-214ENST00000573827 DNAJB4Q9UDY4 337 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 PRKAG3Q9UGI9 489 aa19.36■□□□□ 0.69
SMG6-214ENST00000573827 DDHD2O94830 711 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 ARF4P18085 180 aaPredicted RBP19.35■□□□□ 0.69
SMG6-214ENST00000573827 MUTP22033 750 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 AXLP30530 894 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 SLC11A1P49279 550 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 NDUFV1P49821 464 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 PTGDRQ13258 359 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 TFDP1Q14186 410 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 ADHFE1Q8IWW8 467 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 MRPL43Q8N983 215 aaKnown RBP19.35■□□□□ 0.69
SMG6-214ENST00000573827 MICAL1Q8TDZ2 1067 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 PGBD4Q96DM1 585 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 IGSF21Q96ID5 467 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 CPB2Q96IY4 423 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.35■□□□□ 0.69
SMG6-214ENST00000573827 PUF60Q9UHX1 559 aaKnown RBP19.35■□□□□ 0.69
SMG6-214ENST00000573827 INPP5FQ9Y2H2 1132 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 IPPQ9Y573 584 aa19.35■□□□□ 0.69
SMG6-214ENST00000573827 CNTNAP2Q9UHC6 1331 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 C2orf71A6NGG8 1288 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 TTLL13PA6NNM8 815 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 PI4K2BG5E9Z4 385 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 INO80B-WBP1J3KQ70 363 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 ZC3H11AO75152 810 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMG6-214ENST00000573827 CYP11B2P19099 503 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 PDIA5Q14554 519 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 PADI6Q6TGC4 694 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 MCPH1Q8NEM0 835 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 SUSD6Q92537 303 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
SMG6-214ENST00000573827 ZBP1Q9H171 429 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 CSRNP2Q9H175 543 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 FZD8Q9H461 694 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 RSAD1Q9HA92 442 aa19.34■□□□□ 0.69
SMG6-214ENST00000573827 NOL7Q9UMY1 257 aaKnown RBP19.34■□□□□ 0.69
SMG6-214ENST00000573827 A0A1B0GUA9 196 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 ERLIN2O94905 339 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 EFEMP2O95967 443 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 EDN1P05305 212 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 ALDH7A1P49419 539 aaKnown RBP19.33■□□□□ 0.68
SMG6-214ENST00000573827 KRT17Q04695 432 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 NOTUMQ6P988 496 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 SYCE2Q6PIF2 218 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 GSTCDQ8NEC7 633 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 ERMNQ8TAM6 284 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 S1PR5Q9H228 398 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 ENTPD7Q9NQZ7 604 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 FAM50BQ9Y247 325 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 HES2Q9Y543 173 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 IRAK3Q9Y616 596 aa19.33■□□□□ 0.68
SMG6-214ENST00000573827 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 GJB2P29033 226 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 PRPHP41219 470 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 DSC1Q08554 894 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 GNL2Q13823 731 aaKnown RBP19.32■□□□□ 0.68
SMG6-214ENST00000573827 FAM187BQ17R55 369 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 HAUS3Q68CZ6 603 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 MAEAQ7L5Y9 396 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 DDX53Q86TM3 631 aaKnown RBP19.32■□□□□ 0.68
SMG6-214ENST00000573827 CNNM3Q8NE01 707 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 CCDC43Q96MW1 224 aaKnown RBP19.32■□□□□ 0.68
SMG6-214ENST00000573827 CCDC113Q9H0I3 377 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 MIOSQ9NXC5 875 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 LRWD1Q9UFC0 647 aa19.32■□□□□ 0.68
SMG6-214ENST00000573827 USP15Q9Y4E8 981 aaPredicted RBP19.32■□□□□ 0.68
SMG6-214ENST00000573827 WDFY4Q6ZS81 3184 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 ARL5CA6NH57 179 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 CCT6AP40227 531 aaKnown RBP19.31■□□□□ 0.68
SMG6-214ENST00000573827 SMC1AQ14683 1233 aaKnown RBP19.31■□□□□ 0.68
SMG6-214ENST00000573827 TMC7Q7Z402 723 aa19.31■□□□□ 0.68
SMG6-214ENST00000573827 CDR2LQ86X02 465 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms